p-value: | 1e-13 |
log p-value: | -3.021e+01 |
Information Content per bp: | 1.876 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.65% |
Number of Background Sequences with motif | 1.6 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 56.8 +/- 31.6bp |
Average Position of motif in Background | 45.9 +/- 15.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0060.1_Smad3_1/Jaspar
Match Rank: | 1 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTTCCAGACHTCT-- CAAATCCAGACATCACA |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CTTCCAGACHTCT ---CCAGACRSVB |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CTTCCAGACHTCT ---CCAGACAG-- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTTCCAGACHTCT ATGCCAGACN--- |
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PB0193.1_Tcfe2a_2/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CTTCCAGACHTCT------ --CCNNACCATCTGGCCTN |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CTTCCAGACHTCT -----TGACCYCT |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CTTCCAGACHTCT ---BCAGACWA-- |
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PROX1/MA0794.1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTTCCAGACHTCT-- ---CAAGACGCCTTA |
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PB0126.1_Gata5_2/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTTCCAGACHTCT----- -NNNCTGATATCTCNNNN |
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VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------CTTCCAGACHTCT NNNTGAACTCNNTGACCTCN |
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