Information for 3-GCCAGGGGGAGGMATG (Motif 5)

A T C G T A G C A G T C C G T A A C T G C A T G C T A G A C T G A C T G G T C A C T A G A C T G G T A C G C T A A C G T A C T G
Reverse Opposite:
G T A C G T C A C A G T A C T G A G T C A G T C A C G T A G T C A G T C A G T C G T A C A G T C C G A T A C T G A C T G T A G C
p-value:1e-14
log p-value:-3.413e+01
Information Content per bp:1.789
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.8 +/- 24.2bp
Average Position of motif in Background66.0 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGGGGGAGGMATG
DCHCAGCAGGRGGCC--
 A C G T A T C G T A G C A G T C C G T A A C T G C A T G C T A G A C T G A C T G G T C A C T A G A C T G G T A C G C T A A C G T A C T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GCCAGGGGGAGGMATG
------GGGAGGACNG
 A T C G T A G C A G T C C G T A A C T G C A T G C T A G A C T G A C T G G T C A C T A G A C T G G T A C G C T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGGGGGAGGMATG
NCNCAGCGGGGGGTC--
 A C G T A T C G T A G C A G T C C G T A A C T G C A T G C T A G A C T G A C T G G T C A C T A G A C T G G T A C G C T A A C G T A C T G
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCAGGGGGAGGMATG
NNNNGGGGGAAGANGG
 A T C G T A G C A G T C C G T A A C T G C A T G C T A G A C T G A C T G G T C A C T A G A C T G G T A C G C T A A C G T A C T G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCCAGGGGGAGGMATG
----GGGGGGGG----
 A T C G T A G C A G T C C G T A A C T G C A T G C T A G A C T G A C T G G T C A C T A G A C T G G T A C G C T A A C G T A C T G
A C G T A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGGGGGAGGMATG
NCGCAGCGGGGGGTC--
 A C G T A T C G T A G C A G T C C G T A A C T G C A T G C T A G A C T G A C T G G T C A C T A G A C T G G T A C G C T A A C G T A C T G
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCAGGGGGAGGMATG
CACAGCAGGGGG----
 A T C G T A G C A G T C C G T A A C T G C A T G C T A G A C T G A C T G G T C A C T A G A C T G G T A C G C T A A C G T A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCAGGGGGAGGMATG----
GCCASCAGGGGGCGCYVNNG
 A T C G T A G C A G T C C G T A A C T G C A T G C T A G A C T G A C T G G T C A C T A G A C T G G T A C G C T A A C G T A C T G A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCCAGGGGGAGGMATG
----GGGGGCGGGGC-
 A T C G T A G C A G T C C G T A A C T G C A T G C T A G A C T G A C T G G T C A C T A G A C T G G T A C G C T A A C G T A C T G
A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCCAGGGGGAGGMATG
CACAGCGGGGGGTC--
 A T C G T A G C A G T C C G T A A C T G C A T G C T A G A C T G A C T G G T C A C T A G A C T G G T A C G C T A A C G T A C T G
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T A C G T