Information for 3-YCTGTCARBW (Motif 3)

G A T C G T A C A C G T A C T G G C A T A G T C G C T A C T A G A C G T G C A T
Reverse Opposite:
C G T A T G C A G A T C C G A T C T A G C G T A A G T C C G T A C A T G C T A G
p-value:1e-31
log p-value:-7.219e+01
Information Content per bp:1.611
Number of Target Sequences with motif226.0
Percentage of Target Sequences with motif27.13%
Number of Background Sequences with motif5632.9
Percentage of Background Sequences with motif12.06%
Average Position of motif in Targets49.8 +/- 24.6bp
Average Position of motif in Background50.5 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:YCTGTCARBW
GCTGTCAA--
 G A T C G T A C A C G T A C T G G C A T A G T C G C T A C T A G A C G T G C A T
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-YCTGTCARBW
VGCTGWCAVB-
 A C G T G A T C G T A C A C G T A C T G G C A T A G T C G C T A C T A G A C G T G C A T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:YCTGTCARBW
CCTGTCAA--
 G A T C G T A C A C G T A C T G G C A T A G T C G C T A C T A G A C G T G C A T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.89
Offset:1
Orientation:forward strand
Alignment:YCTGTCARBW
-YTGWCADY-
 G A T C G T A C A C G T A C T G G C A T A G T C G C T A C T A G A C G T G C A T
A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.89
Offset:2
Orientation:forward strand
Alignment:YCTGTCARBW
--TGTCANYT
 G A T C G T A C A C G T A C T G G C A T A G T C G C T A C T A G A C G T G C A T
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:YCTGTCARBW
-NTGTCAN--
 G A T C G T A C A C G T A C T G G C A T A G T C G C T A C T A G A C G T G C A T
A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.85
Offset:-5
Orientation:forward strand
Alignment:-----YCTGTCARBW-
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A C G T G A T C G T A C A C G T A C T G G C A T A G T C G C T A C T A G A C G T G C A T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.84
Offset:-5
Orientation:forward strand
Alignment:-----YCTGTCARBW-
AATTACCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T G A T C G T A C A C G T A C T G G C A T A G T C G C T A C T A G A C G T G C A T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0104.1_Meis2/Jaspar

Match Rank:9
Score:0.83
Offset:-5
Orientation:forward strand
Alignment:-----YCTGTCARBW-
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T G A T C G T A C A C G T A C T G G C A T A G T C G C T A C T A G A C G T G C A T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.82
Offset:-5
Orientation:reverse strand
Alignment:-----YCTGTCARBW--
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T G A T C G T A C A C G T A C T G G C A T A G T C G C T A C T A G A C G T G C A T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C