Information for 8-GCAGTTCCCG (Motif 8)

A C T G G T A C C G T A A T C G A G C T A C G T A G T C A G T C A T G C A T C G
Reverse Opposite:
T A G C T A C G C T A G C T A G G T C A T C G A A T G C A C G T A C T G A G T C
p-value:1e-10
log p-value:-2.419e+01
Information Content per bp:1.791
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif272.1
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets57.1 +/- 24.3bp
Average Position of motif in Background51.1 +/- 36.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCAGTTCCCG---------
TGCAGTTCCNNNNNTGGCCA
 A C G T A C T G G T A C C G T A A T C G A G C T A C G T A G T C A G T C A T G C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T A C G G A T C G C T A T C A G G A C T C G A T G T A C G A T C G T C A T C G A T G A C C G T A C T A G G A C T C T A G C T A G G T A C A G T C C G T A

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGTTCCCG--
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A A T C G A G C T A C G T A G T C A G T C A T G C A T C G A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTTCCCG-
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A A T C G A G C T A C G T A G T C A G T C A T G C A T C G A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCAGTTCCCG
SDGCAGGTGCNS
 A C G T A C G T A C T G G T A C C G T A A T C G A G C T A C G T A G T C A G T C A T G C A T C G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCAGTTCCCG
TKCTGTTCCA-
 A C G T A C T G G T A C C G T A A T C G A G C T A C G T A G T C A G T C A T G C A T C G
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCAGTTCCCG
CGCAGCTGCG-
 A C G T A C T G G T A C C G T A A T C G A G C T A C G T A G T C A G T C A T G C A T C G
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

Myb/MA0100.2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCAGTTCCCG
TGGCAGTTGN--
 A C G T A C G T A C T G G T A C C G T A A T C G A G C T A C G T A G T C A G T C A T G C A T C G
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCAGTTCCCG
BRRCVGTTDN--
 A C G T A C G T A C T G G T A C C G T A A T C G A G C T A C G T A G T C A G T C A T G C A T C G
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCAGTTCCCG
AGCAGCTGCT-
 A C G T A C T G G T A C C G T A A T C G A G C T A C G T A G T C A G T C A T G C A T C G
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCAGTTCCCG-
AGCAGCTGCTNN
 A C G T A C T G G T A C C G T A A T C G A G C T A C G T A G T C A G T C A T G C A T C G A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C