Information for 7-TAGCACAGGC (Motif 5)

A G C T C G T A C T A G A G T C C G T A T G A C C G T A T A C G A C T G A T G C
Reverse Opposite:
A T C G A G T C A G T C C G A T A C T G C G A T A C T G A G T C G C A T C T G A
p-value:1e-11
log p-value:-2.735e+01
Information Content per bp:1.837
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif62.2
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets60.2 +/- 22.7bp
Average Position of motif in Background46.8 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TAGCACAGGC
AAAAATAACAAACGG
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A C T A G A G T C C G T A T G A C C G T A T A C G A C T G A T G C
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAGCACAGGC----
AGCGGCACACACGCAA
 A C G T A C G T A G C T C G T A C T A G A G T C C G T A T G A C C G T A T A C G A C T G A T G C A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TAGCACAGGC---
NNTTTGCACACGGCCC
 A C G T A C G T A C G T A G C T C G T A C T A G A G T C C G T A T G A C C G T A T A C G A C T G A T G C A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAGCACAGGC
CCAGGAACAG--
 A C G T A C G T A G C T C G T A C T A G A G T C C G T A T G A C C G T A T A C G A C T G A T G C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TAGCACAGGC--
-TGCGCAGGCGC
 A G C T C G T A C T A G A G T C C G T A T G A C C G T A T A C G A C T G A T G C A C G T A C G T
A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TAGCACAGGC
---CACAGN-
 A G C T C G T A C T A G A G T C C G T A T G A C C G T A T A C G A C T G A T G C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

Myc/MA0147.2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAGCACAGGC
AAGCACATGG
 A G C T C G T A C T A G A G T C C G T A T G A C C G T A T A C G A C T G A T G C
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TAGCACAGGC
NWAACCACADNN
 A C G T A C G T A G C T C G T A C T A G A G T C C G T A T G A C C G T A T A C G A C T G A T G C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TAGCACAGGC
AAACCACAGC-
 A C G T A G C T C G T A C T A G A G T C C G T A T G A C C G T A T A C G A C T G A T G C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

MTF1/MA0863.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TAGCACAGGC---
TTTGCACACGGCAC
 A C G T A G C T C G T A C T A G A G T C C G T A T G A C C G T A T A C G A C T G A T G C A C G T A C G T A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C