Information for 1-HNGCGCCMYCTKGTGG (Motif 1)

G A C T C T A G A T C G G A T C C T A G G T A C A G T C G T C A A G T C A G T C C A G T C A T G A T C G A G C T A C T G A T C G
Reverse Opposite:
A T G C A G T C C T G A T A G C G T A C G T C A A C T G C T A G C A G T A C T G C A T G G A T C C T A G T A G C A G T C C T G A
p-value:1e-192
log p-value:-4.430e+02
Information Content per bp:1.666
Number of Target Sequences with motif142.0
Percentage of Target Sequences with motif14.92%
Number of Background Sequences with motif120.8
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets53.4 +/- 19.5bp
Average Position of motif in Background50.0 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:HNGCGCCMYCTKGTGG---
TAGCGCCCCCTGGTGGCCA
 G A C T C T A G A T C G G A T C C T A G G T A C A G T C G T C A A G T C A G T C C A G T C A T G A T C G A G C T A C T G A T C G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.94
Offset:-3
Orientation:forward strand
Alignment:---HNGCGCCMYCTKGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T G A C T C T A G A T C G G A T C C T A G G T A C A G T C G T C A A G T C A G T C C A G T C A T G A T C G A G C T A C T G A T C G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-HNGCGCCMYCTKGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T G A C T C T A G A T C G G A T C C T A G G T A C A G T C G T C A A G T C A G T C C A G T C A T G A T C G A G C T A C T G A T C G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:HNGCGCCMYCTKGTGG
----GCCATCTGTT--
 G A C T C T A G A T C G G A T C C T A G G T A C A G T C G T C A A G T C A G T C C A G T C A T G A T C G A G C T A C T G A T C G
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:HNGCGCCMYCTKGTGG
-GCCGCCATCTTG---
 G A C T C T A G A T C G G A T C C T A G G T A C A G T C G T C A A G T C A G T C C A G T C A T G A T C G A G C T A C T G A T C G
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:HNGCGCCMYCTKGTGG--
---CCCCCCCGGGGGGGT
 G A C T C T A G A T C G G A T C C T A G G T A C A G T C G T C A A G T C A G T C C A G T C A T G A T C G A G C T A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:HNGCGCCMYCTKGTGG-
---CACCCCCGGGGGGG
 G A C T C T A G A T C G G A T C C T A G G T A C A G T C G T C A A G T C A G T C C A G T C A T G A T C G A G C T A C T G A T C G A C G T
A C G T A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--HNGCGCCMYCTKGTGG
GGTCCCGCCCCCTTCTC-
 A C G T A C G T G A C T C T A G A T C G G A T C C T A G G T A C A G T C G T C A A G T C A G T C C A G T C A T G A T C G A G C T A C T G A T C G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:HNGCGCCMYCTKGTGG--
---CCCCCCCGGGGGGGT
 G A C T C T A G A T C G G A T C C T A G G T A C A G T C G T C A A G T C A G T C C A G T C A T G A T C G A G C T A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:HNGCGCCMYCTKGTGG
----ACCATCTGTT--
 G A C T C T A G A T C G G A T C C T A G G T A C A G T C G T C A A G T C A G T C C A G T C A T G A T C G A G C T A C T G A T C G
A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T