Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 850)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 47584)	% of Background Sequences with Motif
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-111	-2.561e+02	0.0000	179.0	21.06%	1099.2	2.31%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-105	-2.439e+02	0.0000	186.0	21.88%	1307.7	2.75%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-105	-2.432e+02	0.0000	167.0	19.65%	991.1	2.08%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-104	-2.413e+02	0.0000	176.0	20.71%	1152.4	2.42%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e-102	-2.371e+02	0.0000	165.0	19.41%	999.5	2.10%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-102	-2.357e+02	0.0000	196.0	23.06%	1564.5	3.29%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-101	-2.340e+02	0.0000	182.0	21.41%	1313.6	2.76%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-95	-2.207e+02	0.0000	138.0	16.24%	691.3	1.45%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-86	-1.992e+02	0.0000	111.0	13.06%	446.1	0.94%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-56	-1.294e+02	0.0000	68.0	8.00%	241.2	0.51%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-44	-1.030e+02	0.0000	72.0	8.47%	425.1	0.89%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-41	-9.564e+01	0.0000	102.0	12.00%	1065.9	2.24%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-36	-8.388e+01	0.0000	65.0	7.65%	449.4	0.94%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e-27	-6.334e+01	0.0000	207.0	24.35%	5222.4	10.97%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-16	-3.901e+01	0.0000	24.0	2.82%	119.3	0.25%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-15	-3.474e+01	0.0000	39.0	4.59%	436.5	0.92%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-14	-3.367e+01	0.0000	101.0	11.88%	2385.4	5.01%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-13	-3.206e+01	0.0000	107.0	12.59%	2672.2	5.61%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-13	-3.052e+01	0.0000	134.0	15.76%	3805.3	7.99%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-13	-3.025e+01	0.0000	88.0	10.35%	2044.9	4.29%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e-12	-2.917e+01	0.0000	18.0	2.12%	92.2	0.19%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-11	-2.716e+01	0.0000	18.0	2.12%	104.1	0.22%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-11	-2.596e+01	0.0000	18.0	2.12%	112.2	0.24%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-11	-2.574e+01	0.0000	113.0	13.29%	3204.7	6.73%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-10	-2.382e+01	0.0000	80.0	9.41%	2008.0	4.22%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-8	-2.047e+01	0.0000	56.0	6.59%	1268.2	2.66%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-8	-1.942e+01	0.0000	56.0	6.59%	1307.6	2.75%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-8	-1.921e+01	0.0000	63.0	7.41%	1571.8	3.30%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-7	-1.800e+01	0.0000	60.0	7.06%	1511.9	3.18%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-7	-1.730e+01	0.0000	94.0	11.06%	2907.0	6.10%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-7	-1.697e+01	0.0000	59.0	6.94%	1519.5	3.19%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-7	-1.651e+01	0.0000	59.0	6.94%	1540.4	3.23%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-7	-1.623e+01	0.0000	79.0	9.29%	2348.4	4.93%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-6	-1.505e+01	0.0000	48.0	5.65%	1192.8	2.50%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-6	-1.477e+01	0.0000	34.0	4.00%	709.0	1.49%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-5	-1.303e+01	0.0000	49.0	5.76%	1322.8	2.78%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-5	-1.267e+01	0.0000	65.0	7.65%	1985.3	4.17%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-5	-1.238e+01	0.0000	31.0	3.65%	687.4	1.44%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-5	-1.237e+01	0.0000	61.0	7.18%	1838.5	3.86%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e-5	-1.217e+01	0.0000	29.0	3.41%	626.2	1.32%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e-4	-1.101e+01	0.0001	26.0	3.06%	563.9	1.18%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e-4	-1.085e+01	0.0002	51.0	6.00%	1519.8	3.19%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-4	-1.059e+01	0.0002	56.0	6.59%	1742.9	3.66%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-4	-1.044e+01	0.0002	65.0	7.65%	2135.6	4.49%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-3	-9.140e+00	0.0009	252.0	29.65%	11448.7	24.04%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-3	-9.124e+00	0.0009	43.0	5.06%	1295.8	2.72%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e-3	-8.853e+00	0.0011	101.0	11.88%	3913.3	8.22%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-3	-8.773e+00	0.0012	37.0	4.35%	1072.5	2.25%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-3	-8.437e+00	0.0016	73.0	8.59%	2654.8	5.58%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e-3	-8.305e+00	0.0018	15.0	1.76%	284.7	0.60%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-3	-8.219e+00	0.0019	24.0	2.82%	597.1	1.25%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e-3	-7.899e+00	0.0026	16.0	1.88%	328.1	0.69%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e-3	-7.823e+00	0.0027	8.0	0.94%	96.5	0.20%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-3	-7.694e+00	0.0031	87.0	10.24%	3379.4	7.10%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-3	-7.462e+00	0.0038	99.0	11.65%	3978.8	8.36%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-3	-7.345e+00	0.0042	55.0	6.47%	1939.6	4.07%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-3	-7.340e+00	0.0042	32.0	3.76%	952.2	2.00%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-3	-7.253e+00	0.0044	293.0	34.47%	13979.4	29.36%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e-3	-7.238e+00	0.0044	37.0	4.35%	1165.2	2.45%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-3	-7.218e+00	0.0044	44.0	5.18%	1465.8	3.08%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-3	-7.153e+00	0.0047	189.0	22.24%	8528.9	17.91%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-2	-6.907e+00	0.0059	30.0	3.53%	896.6	1.88%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-2	-6.790e+00	0.0065	96.0	11.29%	3917.8	8.23%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e-2	-6.766e+00	0.0066	37.0	4.35%	1197.4	2.51%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-2	-6.676e+00	0.0071	31.0	3.65%	951.7	2.00%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-2	-6.674e+00	0.0071	43.0	5.06%	1463.3	3.07%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-2	-6.662e+00	0.0071	61.0	7.18%	2274.9	4.78%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e-2	-6.609e+00	0.0072	38.0	4.47%	1251.9	2.63%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e-2	-6.550e+00	0.0075	18.0	2.12%	446.6	0.94%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-2	-6.502e+00	0.0078	39.0	4.59%	1302.1	2.73%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-2	-6.337e+00	0.0091	56.0	6.59%	2076.2	4.36%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-2	-6.283e+00	0.0094	113.0	13.29%	4821.4	10.13%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-2	-6.221e+00	0.0099	132.0	15.53%	5781.1	12.14%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e-2	-6.013e+00	0.0120	43.0	5.06%	1517.2	3.19%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-2	-5.738e+00	0.0156	51.0	6.00%	1905.3	4.00%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-2	-5.607e+00	0.0176	8.0	0.94%	137.7	0.29%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-2	-5.474e+00	0.0198	104.0	12.24%	4496.6	9.44%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e-2	-5.293e+00	0.0234	15.0	1.76%	388.0	0.81%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e-2	-5.248e+00	0.0242	15.0	1.76%	390.2	0.82%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-2	-5.125e+00	0.0271	73.0	8.59%	3019.0	6.34%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-2	-5.092e+00	0.0276	36.0	4.24%	1283.8	2.70%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e-2	-5.091e+00	0.0276	7.0	0.82%	119.5	0.25%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-2	-4.929e+00	0.0317	20.0	2.35%	604.9	1.27%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e-2	-4.890e+00	0.0326	3.0	0.35%	22.7	0.05%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e-2	-4.737e+00	0.0375	11.0	1.29%	263.4	0.55%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e-2	-4.673e+00	0.0396	26.0	3.06%	875.1	1.84%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e-2	-4.659e+00	0.0397	84.0	9.88%	3627.4	7.62%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-1	-4.544e+00	0.0440	35.0	4.12%	1287.8	2.70%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-1	-4.499e+00	0.0455	80.0	9.41%	3454.0	7.25%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e-1	-4.478e+00	0.0459	32.0	3.76%	1157.9	2.43%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e-1	-4.461e+00	0.0462	156.0	18.35%	7345.5	15.43%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e-1	-4.316e+00	0.0529	52.0	6.12%	2109.5	4.43%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e-1	-4.315e+00	0.0529	22.0	2.59%	728.7	1.53%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e-1	-4.255e+00	0.0549	8.0	0.94%	174.9	0.37%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-1	-4.207e+00	0.0571	41.0	4.82%	1599.0	3.36%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e-1	-4.103e+00	0.0626	63.0	7.41%	2672.2	5.61%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e-1	-4.061e+00	0.0646	21.0	2.47%	703.6	1.48%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e-1	-4.047e+00	0.0649	31.0	3.65%	1152.0	2.42%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e-1	-3.845e+00	0.0786	39.0	4.59%	1545.5	3.25%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e-1	-3.742e+00	0.0863	6.0	0.71%	122.4	0.26%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e-1	-3.701e+00	0.0890	18.0	2.12%	599.9	1.26%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e-1	-3.686e+00	0.0895	8.0	0.94%	194.0	0.41%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e-1	-3.674e+00	0.0897	70.0	8.24%	3086.3	6.48%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-1	-3.647e+00	0.0913	30.0	3.53%	1144.4	2.40%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e-1	-3.600e+00	0.0947	7.0	0.82%	161.2	0.34%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e-1	-3.586e+00	0.0952	44.0	5.18%	1816.8	3.82%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e-1	-3.477e+00	0.1051	6.0	0.71%	130.6	0.27%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e-1	-3.470e+00	0.1051	22.0	2.59%	794.9	1.67%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e-1	-3.458e+00	0.1051	22.0	2.59%	795.5	1.67%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e-1	-3.440e+00	0.1061	68.0	8.00%	3025.3	6.35%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e-1	-3.350e+00	0.1151	11.0	1.29%	326.4	0.69%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-1	-3.303e+00	0.1195	34.0	4.00%	1370.1	2.88%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e-1	-3.274e+00	0.1219	42.0	4.94%	1760.3	3.70%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e-1	-3.236e+00	0.1256	13.0	1.53%	416.6	0.87%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-1	-3.236e+00	0.1256	18.0	2.12%	634.1	1.33%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e-1	-3.222e+00	0.1256	30.0	3.53%	1189.7	2.50%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e-1	-3.023e+00	0.1514	106.0	12.47%	5063.2	10.63%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e-1	-3.020e+00	0.1514	4.0	0.47%	76.2	0.16%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e-1	-2.966e+00	0.1576	78.0	9.18%	3623.9	7.61%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e-1	-2.911e+00	0.1650	7.0	0.82%	188.3	0.40%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-1	-2.880e+00	0.1689	62.0	7.29%	2821.1	5.92%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e-1	-2.841e+00	0.1741	31.0	3.65%	1282.0	2.69%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-1	-2.801e+00	0.1798	7.0	0.82%	193.7	0.41%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e-1	-2.782e+00	0.1818	23.0	2.71%	906.0	1.90%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e-1	-2.765e+00	0.1833	34.0	4.00%	1438.3	3.02%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-1	-2.743e+00	0.1860	2.0	0.24%	23.6	0.05%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e-1	-2.692e+00	0.1941	26.0	3.06%	1059.3	2.22%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e-1	-2.669e+00	0.1971	2.0	0.24%	24.0	0.05%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-1	-2.665e+00	0.1971	85.0	10.00%	4051.7	8.51%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e-1	-2.651e+00	0.1976	37.0	4.35%	1602.2	3.36%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-1	-2.648e+00	0.1976	32.0	3.76%	1356.8	2.85%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e-1	-2.626e+00	0.1995	30.0	3.53%	1261.9	2.65%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e-1	-2.584e+00	0.2066	33.0	3.88%	1414.4	2.97%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-1	-2.557e+00	0.2106	15.0	1.76%	555.6	1.17%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e-1	-2.544e+00	0.2117	34.0	4.00%	1469.6	3.09%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e-1	-2.498e+00	0.2202	17.0	2.00%	653.7	1.37%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e-1	-2.454e+00	0.2283	5.0	0.59%	130.8	0.27%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e-1	-2.449e+00	0.2283	16.0	1.88%	611.7	1.28%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e-1	-2.395e+00	0.2388	189.0	22.24%	9679.3	20.33%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e-1	-2.305e+00	0.2594	15.0	1.76%	578.4	1.21%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-2.290e+00	0.2615	8.0	0.94%	262.4	0.55%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-2.286e+00	0.2615	31.0	3.65%	1358.1	2.85%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-2.278e+00	0.2615	21.0	2.47%	867.3	1.82%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-2.243e+00	0.2684	45.0	5.29%	2073.6	4.35%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-2.226e+00	0.2711	16.0	1.88%	634.0	1.33%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-2.157e+00	0.2884	5.0	0.59%	143.5	0.30%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-2.152e+00	0.2884	52.0	6.12%	2451.6	5.15%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-2.149e+00	0.2884	38.0	4.47%	1733.9	3.64%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-2.139e+00	0.2884	16.0	1.88%	642.6	1.35%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-2.125e+00	0.2898	23.0	2.71%	984.3	2.07%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-2.074e+00	0.3030	5.0	0.59%	147.0	0.31%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-2.057e+00	0.3060	41.0	4.82%	1904.0	4.00%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-2.046e+00	0.3074	27.0	3.18%	1194.7	2.51%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-2.034e+00	0.3093	5.0	0.59%	149.4	0.31%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-2.033e+00	0.3093	12.0	1.41%	463.8	0.97%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-2.025e+00	0.3093	76.0	8.94%	3737.1	7.85%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-2.022e+00	0.3093	28.0	3.29%	1248.1	2.62%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-2.020e+00	0.3093	27.0	3.18%	1198.8	2.52%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-1.998e+00	0.3103	7.0	0.82%	237.1	0.50%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-1.975e+00	0.3157	5.0	0.59%	153.0	0.32%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-1.929e+00	0.3286	199.0	23.41%	10406.6	21.85%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-1.889e+00	0.3398	72.0	8.47%	3562.5	7.48%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-1.888e+00	0.3398	6.0	0.71%	200.9	0.42%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-1.828e+00	0.3566	2.0	0.24%	40.3	0.08%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-1.826e+00	0.3566	44.0	5.18%	2105.4	4.42%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.825e+00	0.3566	6.0	0.71%	204.7	0.43%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-1.814e+00	0.3566	9.0	1.06%	342.8	0.72%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-1.810e+00	0.3566	5.0	0.59%	161.6	0.34%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-1.797e+00	0.3571	42.0	4.94%	2007.9	4.22%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.779e+00	0.3615	12.0	1.41%	488.1	1.03%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-1.779e+00	0.3615	22.0	2.59%	983.3	2.07%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-1.778e+00	0.3615	11.0	1.29%	440.7	0.93%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-1.762e+00	0.3615	17.0	2.00%	735.3	1.54%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-1.762e+00	0.3615	23.0	2.71%	1036.8	2.18%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-1.746e+00	0.3631	14.0	1.65%	589.2	1.24%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-1.735e+00	0.3649	36.0	4.24%	1708.2	3.59%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.703e+00	0.3747	7.0	0.82%	258.7	0.54%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.691e+00	0.3768	5.0	0.59%	168.1	0.35%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-1.682e+00	0.3783	26.0	3.06%	1202.8	2.53%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-1.681e+00	0.3783	144.0	16.94%	7509.9	15.77%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-1.675e+00	0.3783	5.0	0.59%	169.1	0.36%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-1.670e+00	0.3783	30.0	3.53%	1410.3	2.96%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-1.628e+00	0.3907	43.0	5.06%	2097.1	4.40%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-1.617e+00	0.3929	8.0	0.94%	312.8	0.66%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-1.591e+00	0.4006	13.0	1.53%	558.6	1.17%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-1.586e+00	0.4007	11.0	1.29%	460.6	0.97%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-1.578e+00	0.4018	10.0	1.18%	412.1	0.87%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.566e+00	0.4045	14.0	1.65%	611.5	1.28%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-1.550e+00	0.4088	8.0	0.94%	318.9	0.67%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-1.527e+00	0.4163	13.0	1.53%	566.4	1.19%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-1.520e+00	0.4167	26.0	3.06%	1231.9	2.59%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-1.519e+00	0.4167	13.0	1.53%	567.4	1.19%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-1.516e+00	0.4167	81.0	9.53%	4156.8	8.73%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-1.507e+00	0.4167	47.0	5.53%	2338.8	4.91%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-1.495e+00	0.4186	24.0	2.82%	1132.8	2.38%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-1.494e+00	0.4186	26.0	3.06%	1236.0	2.60%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-1.435e+00	0.4398	9.0	1.06%	378.2	0.79%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-1.428e+00	0.4410	6.0	0.71%	233.8	0.49%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-1.420e+00	0.4419	3.0	0.35%	95.6	0.20%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-1.375e+00	0.4603	21.0	2.47%	998.9	2.10%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-1.354e+00	0.4678	12.0	1.41%	538.4	1.13%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	-1.340e+00	0.4717	1.0	0.12%	17.6	0.04%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-1.326e+00	0.4763	39.0	4.59%	1960.0	4.12%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-1.312e+00	0.4805	27.0	3.18%	1325.1	2.78%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-1.310e+00	0.4805	172.0	20.24%	9215.2	19.35%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-1.309e+00	0.4805	93.0	10.94%	4883.1	10.26%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-1.309e+00	0.4805	8.0	0.94%	342.1	0.72%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-1.305e+00	0.4805	25.0	2.94%	1221.0	2.56%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-1.294e+00	0.4805	23.0	2.71%	1118.2	2.35%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-1.270e+00	0.4866	22.0	2.59%	1070.4	2.25%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-1.257e+00	0.4906	6.0	0.71%	248.1	0.52%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-1.257e+00	0.4906	27.0	3.18%	1337.1	2.81%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-1.257e+00	0.4906	3.0	0.35%	104.8	0.22%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-1.247e+00	0.4906	6.0	0.71%	249.7	0.52%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-1.246e+00	0.4906	5.0	0.59%	200.4	0.42%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-1.236e+00	0.4906	8.0	0.94%	350.3	0.74%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.210e+00	0.5000	8.0	0.94%	353.4	0.74%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-1.189e+00	0.5084	34.0	4.00%	1727.5	3.63%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-1.177e+00	0.5121	9.0	1.06%	408.2	0.86%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.164e+00	0.5167	11.0	1.29%	513.5	1.08%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-1.163e+00	0.5167	18.0	2.12%	880.4	1.85%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-1.130e+00	0.5298	3.0	0.35%	112.8	0.24%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-1.124e+00	0.5302	1.0	0.12%	22.1	0.05%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-1.096e+00	0.5432	26.0	3.06%	1321.5	2.78%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-1.082e+00	0.5483	7.0	0.82%	317.4	0.67%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-1.067e+00	0.5543	43.0	5.06%	2249.9	4.72%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-1.042e+00	0.5657	18.0	2.12%	904.1	1.90%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-1.036e+00	0.5663	56.0	6.59%	2969.6	6.24%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-1.032e+00	0.5664	77.0	9.06%	4123.4	8.66%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-1.023e+00	0.5692	57.0	6.71%	3029.6	6.36%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	-1.021e+00	0.5692	1.0	0.12%	25.1	0.05%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.005e+00	0.5743	27.0	3.18%	1398.1	2.94%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-9.947e-01	0.5778	144.0	16.94%	7843.4	16.47%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-9.905e-01	0.5778	3.0	0.35%	122.8	0.26%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-9.878e-01	0.5778	66.0	7.76%	3537.1	7.43%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-9.744e-01	0.5821	23.0	2.71%	1189.2	2.50%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-9.627e-01	0.5865	7.0	0.82%	333.0	0.70%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-9.444e-01	0.5948	28.0	3.29%	1469.8	3.09%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	-9.328e-01	0.5992	1.0	0.12%	28.4	0.06%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-9.177e-01	0.6058	2.0	0.24%	77.0	0.16%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-9.161e-01	0.6058	3.0	0.35%	128.4	0.27%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-9.085e-01	0.6064	17.0	2.00%	879.1	1.85%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-8.995e-01	0.6093	38.0	4.47%	2031.6	4.27%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-8.892e-01	0.6131	63.0	7.41%	3414.9	7.17%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-8.588e-01	0.6295	3.0	0.35%	133.2	0.28%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-8.381e-01	0.6400	98.0	11.53%	5381.7	11.30%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-8.350e-01	0.6400	6.0	0.71%	296.6	0.62%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-8.245e-01	0.6436	39.0	4.59%	2113.7	4.44%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-8.226e-01	0.6436	52.0	6.12%	2834.3	5.95%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-8.167e-01	0.6436	21.0	2.47%	1121.4	2.35%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-8.110e-01	0.6445	50.0	5.88%	2728.6	5.73%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-7.991e-01	0.6496	28.0	3.29%	1514.0	3.18%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-7.744e-01	0.6606	12.0	1.41%	635.9	1.34%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-7.744e-01	0.6606	12.0	1.41%	635.5	1.33%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-7.596e-01	0.6678	5.0	0.59%	252.2	0.53%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-7.519e-01	0.6703	103.0	12.12%	5711.9	12.00%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-7.491e-01	0.6703	17.0	2.00%	918.8	1.93%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-7.362e-01	0.6757	13.0	1.53%	699.9	1.47%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-7.328e-01	0.6757	8.0	0.94%	422.2	0.89%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-7.144e-01	0.6853	33.0	3.88%	1821.1	3.82%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-7.034e-01	0.6902	37.0	4.35%	2049.9	4.30%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-6.856e-01	0.6999	27.0	3.18%	1496.3	3.14%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-6.852e-01	0.6999	8.0	0.94%	431.1	0.91%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-6.805e-01	0.6999	29.0	3.41%	1610.0	3.38%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-6.724e-01	0.7012	1.0	0.12%	40.9	0.09%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-6.073e-01	0.7455	8.0	0.94%	447.1	0.94%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-5.992e-01	0.7488	55.0	6.47%	3111.4	6.53%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-5.960e-01	0.7488	12.0	1.41%	678.4	1.42%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-5.688e-01	0.7661	33.0	3.88%	1882.4	3.95%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-5.680e-01	0.7661	86.0	10.12%	4880.7	10.25%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-5.517e-01	0.7736	59.0	6.94%	3365.1	7.07%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-5.486e-01	0.7736	69.0	8.12%	3933.3	8.26%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-5.455e-01	0.7736	9.0	1.06%	520.0	1.09%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-5.397e-01	0.7744	6.0	0.71%	346.2	0.73%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-5.294e-01	0.7796	15.0	1.76%	870.3	1.83%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-5.108e-01	0.7913	7.0	0.82%	411.4	0.86%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-5.092e-01	0.7913	14.0	1.65%	819.9	1.72%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-5.024e-01	0.7923	68.0	8.00%	3908.5	8.21%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-5.016e-01	0.7923	5.0	0.59%	295.6	0.62%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-4.784e-01	0.8057	9.0	1.06%	537.2	1.13%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-4.734e-01	0.8069	68.0	8.00%	3929.4	8.25%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-4.731e-01	0.8069	5.0	0.59%	301.1	0.63%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-4.659e-01	0.8072	12.0	1.41%	717.2	1.51%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-4.495e-01	0.8177	3.0	0.35%	184.3	0.39%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-4.491e-01	0.8177	31.0	3.65%	1827.3	3.84%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-4.427e-01	0.8177	8.0	0.94%	488.9	1.03%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-4.425e-01	0.8177	12.0	1.41%	725.9	1.52%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-4.358e-01	0.8177	89.0	10.47%	5155.1	10.83%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-4.328e-01	0.8177	3.0	0.35%	187.9	0.39%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-4.291e-01	0.8177	41.0	4.82%	2415.8	5.07%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-4.193e-01	0.8225	17.0	2.00%	1028.5	2.16%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-4.175e-01	0.8225	16.0	1.88%	970.8	2.04%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-4.146e-01	0.8225	84.0	9.88%	4889.9	10.27%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-4.115e-01	0.8225	3.0	0.35%	191.5	0.40%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-3.962e-01	0.8302	3.0	0.35%	195.0	0.41%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-3.913e-01	0.8315	3.0	0.35%	195.5	0.41%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-3.902e-01	0.8315	38.0	4.47%	2267.2	4.76%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-3.742e-01	0.8402	33.0	3.88%	1987.5	4.17%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-3.720e-01	0.8402	3.0	0.35%	199.9	0.42%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-3.674e-01	0.8403	3.0	0.35%	200.6	0.42%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-3.660e-01	0.8403	5.0	0.59%	327.1	0.69%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-3.628e-01	0.8403	3.0	0.35%	201.6	0.42%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-3.622e-01	0.8403	7.0	0.82%	452.8	0.95%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-3.462e-01	0.8470	133.0	15.65%	7756.3	16.29%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-3.406e-01	0.8489	3.0	0.35%	206.2	0.43%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-3.175e-01	0.8659	4.0	0.47%	277.9	0.58%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-3.086e-01	0.8708	26.0	3.06%	1619.4	3.40%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-2.745e-01	0.8981	19.0	2.24%	1223.2	2.57%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-2.736e-01	0.8981	2.0	0.24%	154.2	0.32%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-2.716e-01	0.8981	15.0	1.76%	982.6	2.06%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-2.627e-01	0.9000	1.0	0.12%	82.4	0.17%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-2.612e-01	0.9000	55.0	6.47%	3366.3	7.07%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-2.482e-01	0.9073	3.0	0.35%	231.4	0.49%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-2.350e-01	0.9165	8.0	0.94%	566.4	1.19%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-2.322e-01	0.9165	7.0	0.82%	503.9	1.06%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-2.215e-01	0.9231	12.0	1.41%	827.5	1.74%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-2.096e-01	0.9312	77.0	9.06%	4717.6	9.91%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-2.063e-01	0.9312	73.0	8.59%	4488.4	9.43%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-1.805e-01	0.9527	3.0	0.35%	256.8	0.54%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-1.787e-01	0.9527	87.0	10.24%	5351.5	11.24%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-1.761e-01	0.9527	35.0	4.12%	2277.9	4.78%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-1.733e-01	0.9527	114.0	13.41%	6933.9	14.56%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-1.727e-01	0.9527	4.0	0.47%	331.9	0.70%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.691e-01	0.9527	2.0	0.24%	186.0	0.39%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.691e-01	0.9527	2.0	0.24%	186.0	0.39%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-1.676e-01	0.9527	7.0	0.82%	539.0	1.13%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.631e-01	0.9527	7.0	0.82%	542.4	1.14%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-1.587e-01	0.9527	3.0	0.35%	266.7	0.56%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-1.507e-01	0.9527	29.0	3.41%	1944.2	4.08%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-1.492e-01	0.9527	10.0	1.18%	751.7	1.58%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-1.456e-01	0.9527	2.0	0.24%	196.3	0.41%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-1.360e-01	0.9570	23.0	2.71%	1592.8	3.35%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-1.223e-01	0.9673	5.0	0.59%	433.6	0.91%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-1.217e-01	0.9673	6.0	0.71%	504.8	1.06%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-1.123e-01	0.9711	4.0	0.47%	368.5	0.77%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-1.074e-01	0.9730	33.0	3.88%	2256.3	4.74%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-1.048e-01	0.9730	11.0	1.29%	862.0	1.81%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-1.000e-01	0.9744	2.0	0.24%	221.4	0.46%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-8.535e-02	0.9859	53.0	6.24%	3529.2	7.41%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-8.125e-02	0.9870	44.0	5.18%	2990.8	6.28%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-7.802e-02	0.9873	8.0	0.94%	690.9	1.45%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-6.433e-02	0.9980	48.0	5.65%	3285.6	6.90%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-4.899e-02	1.0000	13.0	1.53%	1090.2	2.29%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-4.247e-02	1.0000	19.0	2.24%	1514.2	3.18%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-3.908e-02	1.0000	66.0	7.76%	4498.3	9.45%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-2.020e-02	1.0000	10.0	1.18%	976.9	2.05%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-1.546e-02	1.0000	9.0	1.06%	928.2	1.95%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-7.717e-03	1.0000	33.0	3.88%	2692.6	5.65%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-8.350e-04	1.0000	42.0	4.94%	3609.9	7.58%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-4.420e-04	1.0000	42.0	4.94%	3693.3	7.76%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-2.100e-05	1.0000	45.0	5.29%	4275.7	8.98%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	0.000e+00	1.0000	0.0	0.00%	54.2	0.11%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	196.3	0.41%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	0.000e+00	1.0000	0.0	0.00%	65.4	0.14%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	17.8	0.04%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	18.6	0.04%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	0.000e+00	1.0000	0.0	0.00%	86.7	0.18%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	51.6	0.11%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	0.000e+00	1.0000	0.0	0.00%	88.4	0.19%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	39.8	0.08%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	51.2	0.11%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	2.7	0.01%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	0.000e+00	1.0000	0.0	0.00%	33.0	0.07%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	13.4	0.03%