p-value: | 1e-13 |
log p-value: | -3.215e+01 |
Information Content per bp: | 1.718 |
Number of Target Sequences with motif | 52.0 |
Percentage of Target Sequences with motif | 6.12% |
Number of Background Sequences with motif | 816.8 |
Percentage of Background Sequences with motif | 1.72% |
Average Position of motif in Targets | 51.5 +/- 25.7bp |
Average Position of motif in Background | 49.7 +/- 29.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTGCCARGGA TTGCCAAG-- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 2 |
Score: | 0.70 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTGCCARGGA CGTGCCAAG-- |
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NFIA/MA0670.1/Jaspar
Match Rank: | 3 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTGCCARGGA GGTGCCAAGT- |
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INSM1/MA0155.1/Jaspar
Match Rank: | 4 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GTGCCARGGA--- -TGTCAGGGGGCG |
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NFIC/MA0161.1/Jaspar
Match Rank: | 5 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTGCCARGGA -TGCCAA--- |
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Hic1/MA0739.1/Jaspar
Match Rank: | 6 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTGCCARGGA ATGCCAACC- |
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HIC2/MA0738.1/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTGCCARGGA ATGCCCACC- |
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AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 8 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTGCCARGGA CTGTTCCTGG-- |
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Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 9 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTGCCARGGA AGGTGTCA---- |
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Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GTGCCARGGA -TGTCANYT- |
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