Information for 12-TGTTTTCCTTGGC (Motif 15)

A C G T A C T G A G C T A C G T A C G T C G A T G A T C A T G C G A C T A C G T A C T G A C T G T A G C
Reverse Opposite:
A C T G A G T C A G T C C G T A C G T A T A C G C T A G C G T A C G T A C G T A C T G A T G A C T C G A
p-value:1e-10
log p-value:-2.476e+01
Information Content per bp:1.802
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif40.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets49.5 +/- 15.8bp
Average Position of motif in Background52.0 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--TGTTTTCCTTGGC-
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C T G A G C T A C G T A C G T C G A T G A T C A T G C G A C T A C G T A C T G A C T G T A G C A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

FOXF2/MA0030.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTTCCTTGGC
NTTGTTTACGTTNN-
 A C G T A C G T A C G T A C T G A G C T A C G T A C G T C G A T G A T C A T G C G A C T A C G T A C T G A C T G T A G C
G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TGTTTTCCTTGGC
-ATTTTCCATT--
 A C G T A C T G A G C T A C G T A C G T C G A T G A T C A T G C G A C T A C G T A C T G A C T G T A G C
A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGTTTTCCTTGGC
--TTTTCCA----
 A C G T A C T G A G C T A C G T A C G T C G A T G A T C A T G C G A C T A C G T A C T G A C T G T A G C
A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGTTTTCCTTGGC
CTTTGTTTACTTTTN-
 A C G T A C G T A C G T A C G T A C T G A G C T A C G T A C G T C G A T G A T C A T G C G A C T A C G T A C T G A C T G T A G C
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGTTTTCCTTGGC
TGTTTACTTAGG-
 A C G T A C T G A G C T A C G T A C G T C G A T G A T C A T G C G A C T A C G T A C T G A C T G T A G C
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGTTTTCCTTGGC
TCCATGTTTACTTTG--
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C G T A C G T C G A T G A T C A T G C G A C T A C G T A C T G A C T G T A G C
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGTTTTCCTTGGC
BSNTGTTTACWYWGN-
 A C G T A C G T A C G T A C G T A C T G A G C T A C G T A C G T C G A T G A T C A T G C G A C T A C G T A C T G A C T G T A G C
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGTTTTCCTTGGC--
-GGTTGCCATGGCAA
 A C G T A C T G A G C T A C G T A C G T C G A T G A T C A T G C G A C T A C G T A C T G A C T G T A G C A C G T A C G T
A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGTTTTCCTTGGC----
---TTGCCATGGCAACN
 A C G T A C T G A G C T A C G T A C G T C G A T G A T C A T G C G A C T A C G T A C T G A C T G T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C