Information for 6-TTGGCAGAAGWTGTAT (Motif 14)

A C G T C G A T A C T G A C T G G T A C C G T A A T C G C G T A C G T A A C T G G C A T A C G T T A C G A C G T C G T A G C A T
Reverse Opposite:
C G T A G A C T T G C A A G T C T G C A C G T A A G T C C G A T A C G T A T G C A C G T A C T G G T A C A G T C C G T A C G T A
p-value:1e-10
log p-value:-2.494e+01
Information Content per bp:1.739
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.7 +/- 22.2bp
Average Position of motif in Background37.0 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCAGAAGWTGTAT
NNTTGGCANN--------
 A C G T A C G T A C G T C G A T A C T G A C T G G T A C C G T A A T C G C G T A C G T A A C T G G C A T A C G T T A C G A C G T C G T A G C A T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCAGAAGWTGTAT
CTTGGCAA---------
 A C G T A C G T C G A T A C T G A C T G G T A C C G T A A T C G C G T A C G T A A C T G G C A T A C G T T A C G A C G T C G T A G C A T
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTGGCAGAAGWTGTAT
TTGGCA----------
 A C G T C G A T A C T G A C T G G T A C C G T A A T C G C G T A C G T A A C T G G C A T A C G T T A C G A C G T C G T A G C A T
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCAGAAGWTGTAT
NTTGGCANN--------
 A C G T A C G T C G A T A C T G A C T G G T A C C G T A A T C G C G T A C G T A A C T G G C A T A C G T T A C G A C G T C G T A G C A T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCAGAAGWTGTAT
GGTTGGCAT---------
 A C G T A C G T A C G T C G A T A C T G A C T G G T A C C G T A A T C G C G T A C G T A A C T G G C A T A C G T T A C G A C G T C G T A G C A T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTGGCAGAAGWTGTAT
--GTCACATGAY----
 A C G T C G A T A C T G A C T G G T A C C G T A A T C G C G T A C G T A A C T G G C A T A C G T T A C G A C G T C G T A G C A T
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TTGGCAGAAGWTGTAT
CATCCAGATGTTC---
 A C G T C G A T A C T G A C T G G T A C C G T A A T C G C G T A C G T A A C T G G C A T A C G T T A C G A C G T C G T A G C A T
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------TTGGCAGAAGWTGTAT
NGTAGGTTGGCATNNN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G G T A C C G T A A T C G C G T A C G T A A C T G G C A T A C G T T A C G A C G T C G T A G C A T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TTGGCAGAAGWTGTAT
--TCCAGATGTT----
 A C G T C G A T A C T G A C T G G T A C C G T A A T C G C G T A C G T A A C T G G C A T A C G T T A C G A C G T C G T A G C A T
A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TTGGCAGAAGWTGTAT
TTGACAGC--------
 A C G T C G A T A C T G A C T G G T A C C G T A A T C G C G T A C G T A A C T G G C A T A C G T T A C G A C G T C G T A G C A T
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T