Information for 10-AGCGCCGCTGGAG (Motif 13)

C G T A A C T G A G T C A C T G G A T C A G T C A C T G A G T C A G C T A C T G A T C G C G T A A C T G
Reverse Opposite:
A G T C A C G T A T G C A G T C C T G A A C T G A G T C A C T G C A T G A G T C C T A G A G T C A C G T
p-value:1e-10
log p-value:-2.494e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.8 +/- 29.9bp
Average Position of motif in Background44.6 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCGCCGCTGGAG---
-DCHCAGCAGGRGGCC
 C G T A A C T G A G T C A C T G G A T C A G T C A C T G A G T C A G C T A C T G A T C G C G T A A C T G A C G T A C G T A C G T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGCGCCGCTGGAG--
---GRTGMTRGAGCC
 C G T A A C T G A G T C A C T G G A T C A G T C A C T G A G T C A G C T A C T G A T C G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGCGCCGCTGGAG---
-NCGCAGCGGGGGGTC
 C G T A A C T G A G T C A C T G G A T C A G T C A C T G A G T C A G C T A C T G A T C G C G T A A C T G A C G T A C G T A C G T
A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGCGCCGCTGGAG--
ANTGCCTGAGGCAAN
 C G T A A C T G A G T C A C T G G A T C A G T C A C T G A G T C A G C T A C T G A T C G C G T A A C T G A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGCGCCGCTGGAG---
-NCNCAGCGGGGGGTC
 C G T A A C T G A G T C A C T G G A T C A G T C A C T G A G T C A G C T A C T G A T C G C G T A A C T G A C G T A C G T A C G T
A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGCGCCGCTGGAG-
GAGCACAGCAGGACA
 A C G T C G T A A C T G A G T C A C T G G A T C A G T C A C T G A G T C A G C T A C T G A T C G C G T A A C T G A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGCGCCGCTGGAG-
CCACACAGCAGGAGA
 A C G T C G T A A C T G A G T C A C T G G A T C A G T C A C T G A G T C A G C T A C T G A T C G C G T A A C T G A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGCGCCGCTGGAG-
CCACACAGCAGGAGA
 A C G T C G T A A C T G A G T C A C T G G A T C A G T C A C T G A G T C A G C T A C T G A T C G C G T A A C T G A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AGCGCCGCTGGAG--
-----GGCGGGAARN
 C G T A A C T G A G T C A C T G G A T C A G T C A C T G A G T C A G C T A C T G A T C G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGCGCCGCTGGAG--
NNNNAGCAGCTGCTGAN
 A C G T A C G T C G T A A C T G A G T C A C T G G A T C A G T C A C T G A G T C A G C T A C T G A T C G C G T A A C T G A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G