Information for 1-RATGAGTCAT (Motif 1)

C T A G T C G A A G C T A C T G C G T A A T C G G C A T G T A C G T C A A G C T
Reverse Opposite:
T C G A C A G T A C T G C G T A T A G C G C A T T G A C T C G A A G C T G A T C
p-value:1e-115
log p-value:-2.653e+02
Information Content per bp:1.645
Number of Target Sequences with motif181.0
Percentage of Target Sequences with motif21.29%
Number of Background Sequences with motif1070.7
Percentage of Background Sequences with motif2.25%
Average Position of motif in Targets52.3 +/- 24.3bp
Average Position of motif in Background48.9 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:1
Score:0.99
Offset:0
Orientation:reverse strand
Alignment:RATGAGTCAT--
DATGASTCATNN
 C T A G T C G A A G C T A C T G C G T A A T C G G C A T G T A C G T C A A G C T A C G T A C G T
C A T G T C G A C G A T C A T G G C T A T A G C C G A T G T A C G C T A A G C T G A T C T G A C

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:2
Score:0.99
Offset:0
Orientation:forward strand
Alignment:RATGAGTCAT
RATGASTCAT
 C T A G T C G A A G C T A C T G C G T A A T C G G C A T G T A C G T C A A G C T
C T A G T C G A G C A T C A T G G C T A T A G C C G A T G T A C C T G A A G C T

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:3
Score:0.99
Offset:0
Orientation:forward strand
Alignment:RATGAGTCAT
DATGASTCAT
 C T A G T C G A A G C T A C T G C G T A A T C G G C A T G T A C G T C A A G C T
C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:4
Score:0.99
Offset:-1
Orientation:reverse strand
Alignment:-RATGAGTCAT-
NDATGASTCATH
 A C G T C T A G T C G A A G C T A C T G C G T A A T C G G C A T G T A C G T C A A G C T A C G T
C A T G C T A G T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A G C T G A T C

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.98
Offset:0
Orientation:forward strand
Alignment:RATGAGTCAT--
NATGASTCABNN
 C T A G T C G A A G C T A C T G C G T A A T C G G C A T G T A C G T C A A G C T A C G T A C G T
C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:RATGAGTCAT
GATGAGTCAT
 C T A G T C G A A G C T A C T G C G T A A T C G G C A T G T A C G T C A A G C T
T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-RATGAGTCAT-
NNATGAGTCATN
 A C G T C T A G T C G A A G C T A C T G C G T A A T C G G C A T G T A C G T C A A G C T A C G T
C A T G C T A G T C G A A C G T A C T G C G T A A T C G A C G T G T A C C G T A A G C T G A T C

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:8
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:RATGAGTCAT--
GATGAGTCATCC
 C T A G T C G A A G C T A C T G C G T A A T C G G C A T G T A C G T C A A G C T A C G T A C G T
C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C

JUNB/MA0490.1/Jaspar

Match Rank:9
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:RATGAGTCAT--
-ATGAGTCATCN
 C T A G T C G A A G C T A C T G C G T A A T C G G C A T G T A C G T C A A G C T A C G T A C G T
A C G T T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

FOS/MA0476.1/Jaspar

Match Rank:10
Score:0.96
Offset:0
Orientation:forward strand
Alignment:RATGAGTCAT-
TGTGACTCATT
 C T A G T C G A A G C T A C T G C G T A A T C G G C A T G T A C G T C A A G C T A C G T
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T