Information for 7-CTGACAGATR (Motif 6)

G T A C C G A T C T A G C G T A T G A C C G T A T C A G T G C A A C G T C T A G
Reverse Opposite:
G A T C T G C A A C G T A G T C G C A T A C T G G C A T G A T C G C T A C A T G
p-value:1e-14
log p-value:-3.260e+01
Information Content per bp:1.477
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif9.13%
Number of Background Sequences with motif1616.1
Percentage of Background Sequences with motif3.50%
Average Position of motif in Targets53.8 +/- 26.6bp
Average Position of motif in Background51.9 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-CTGACAGATR
RHTGWCAR---
 A C G T G T A C C G A T C T A G C G T A T G A C C G T A T C A G T G C A A C G T C T A G
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.82
Offset:1
Orientation:forward strand
Alignment:CTGACAGATR
-TGTCANYT-
 G T A C C G A T C T A G C G T A T G A C C G T A T C A G T G C A A C G T C T A G
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-CTGACAGATR
VBTGWCAGCB-
 A C G T G T A C C G A T C T A G C G T A T G A C C G T A T C A G T G C A A C G T C T A G
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CTGACAGATR
TTGACAG---
 G T A C C G A T C T A G C G T A T G A C C G T A T C A G T G C A A C G T C T A G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CTGACAGATR
TTGACAGC--
 G T A C C G A T C T A G C G T A T G A C C G T A T C A G T G C A A C G T C T A G
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CTGACAGATR
TTGACAGG--
 G T A C C G A T C T A G C G T A T G A C C G T A T C A G T G C A A C G T C T A G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----CTGACAGATR---
GATATTGACAGCTGCGT
 A C G T A C G T A C G T A C G T G T A C C G A T C T A G C G T A T G A C C G T A T C A G T G C A A C G T C T A G A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CTGACAGATR---
GTATTGACAGGTNNTT
 A C G T A C G T A C G T G T A C C G A T C T A G C G T A T G A C C G T A T C A G T G C A A C G T C T A G A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CTGACAGATR---
NTATTGACAGCTNNTT
 A C G T A C G T A C G T G T A C C G A T C T A G C G T A T G A C C G T A T C A G T G C A A C G T C T A G A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CTGACAGATR---
NTATTGACAGGTNNTN
 A C G T A C G T A C G T G T A C C G A T C T A G C G T A T G A C C G T A T C A G T G C A A C G T C T A G A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T