Information for 4-CTGATTTAATTAR (Motif 4)

A G T C C G A T T A C G G C T A A C G T A C G T G C A T T C G A G C T A C A G T C A G T C G T A C T A G
Reverse Opposite:
G A T C G C A T G T C A G T C A C A G T A G C T C G T A T G C A T G C A C G A T A T G C C G T A T C A G
p-value:1e-17
log p-value:-4.086e+01
Information Content per bp:1.543
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif9.35%
Number of Background Sequences with motif1451.9
Percentage of Background Sequences with motif3.14%
Average Position of motif in Targets50.6 +/- 28.7bp
Average Position of motif in Background50.4 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DUX4/MA0468.1/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CTGATTTAATTAR
-TGATTAAATTA-
 A G T C C G A T T A C G G C T A A C G T A C G T G C A T T C G A G C T A C A G T C A G T C G T A C T A G
A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A A C G T

PROP1/MA0715.1/Jaspar

Match Rank:2
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CTGATTTAATTAR
-TAATTAAATTA-
 A G T C C G A T T A C G G C T A A C G T A C G T G C A T T C G A G C T A C A G T C A G T C G T A C T A G
A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:3
Score:0.79
Offset:1
Orientation:forward strand
Alignment:CTGATTTAATTAR
-TAATTTAATTA-
 A G T C C G A T T A C G G C T A A C G T A C G T G C A T T C G A G C T A C A G T C A G T C G T A C T A G
A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:4
Score:0.79
Offset:1
Orientation:forward strand
Alignment:CTGATTTAATTAR
-TAATTTAATTA-
 A G T C C G A T T A C G G C T A A C G T A C G T G C A T T C G A G C T A C A G T C A G T C G T A C T A G
A C G T G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CTGATTTAATTAR
YTAATYNRATTA-
 A G T C C G A T T A C G G C T A A C G T A C G T G C A T T C G A G C T A C A G T C A G T C G T A C T A G
G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A A C G T

DUXA/MA0884.1/Jaspar

Match Rank:6
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CTGATTTAATTAR
NTGATTAAATTAN
 A G T C C G A T T A C G G C T A A C G T A C G T G C A T T C G A G C T A C A G T C A G T C G T A C T A G
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

Hoxd3/MA0912.1/Jaspar

Match Rank:7
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CTGATTTAATTAR---
TTGAGTTAATTAACCT
 A G T C C G A T T A C G G C T A A C G T A C G T G C A T T C G A G C T A C A G T C A G T C G T A C T A G A C G T A C G T A C G T
G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

PH0079.1_Hoxd3/Jaspar

Match Rank:8
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CTGATTTAATTAR---
TTGAGTTAATTAACCT
 A G T C C G A T T A C G G C T A A C G T A C G T G C A T T C G A G C T A C A G T C A G T C G T A C T A G A C G T A C G T A C G T
G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

PH0090.1_Lbx2/Jaspar

Match Rank:9
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CTGATTTAATTAR-----
-TGCATTAATTAATGCGA
 A G T C C G A T T A C G G C T A A C G T A C G T G C A T T C G A G C T A C A G T C A G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T A C G G T A C G T C A G A C T G A C T C G T A T C G A A G C T C G A T C T G A C T G A A G C T A C T G T A G C C T A G T C G A

PH0103.1_Meox1/Jaspar

Match Rank:10
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CTGATTTAATTAR---
CTGAGGTAATTACCNC
 A G T C C G A T T A C G G C T A A C G T A C G T G C A T T C G A G C T A C A G T C A G T C G T A C T A G A C G T A C G T A C G T
G A T C C G A T T C A G C T G A C A T G T A C G G A C T T G C A G C T A C A G T A C G T C T G A G T A C G T A C A C G T A G T C