Information for 16-TCAATGCCCCAGA (Motif 24)

A C G T A G T C G T C A G T C A C G A T A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A C G T A C G T A C T G C G T A
p-value:1e-8
log p-value:-1.891e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 25.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCAATGCCCCAGA--
GGGTGTGCCCAAAAGG
 A C G T A C G T A G T C G T C A G T C A C G A T A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCAATGCCCCAGA
NAGGTCANTGACCT---
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A G T C A C G A T A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCAATGCCCCAGA--
TCACCCCGCCCCAAATT
 A C G T A C G T A C G T A G T C G T C A G T C A C G A T A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCAATGCCCCAGA--
ATCCCCGCCCCTAAAA
 A C G T A C G T A G T C G T C A G T C A C G A T A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:TCAATGCCCCAGA-----
--------CCAGACRSVB
 A C G T A G T C G T C A G T C A C G A T A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TCAATGCCCCAGA
---ATGCCCACC-
 A C G T A G T C G T C A G T C A C G A T A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TCAATGCCCCAGA-
---AAACCACAGAN
 A C G T A G T C G T C A G T C A C G A T A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:TCAATGCCCCAGA---
--------CCAGACAG
 A C G T A G T C G T C A G T C A C G A T A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TCAATGCCCCAGA-------
---CAAATCCAGACATCACA
 A C G T A G T C G T C A G T C A C G A T A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TCAATGCCCCAGA-
----TTCCKNAGAA
 A C G T A G T C G T C A G T C A C G A T A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A