Information for 12-GTTATTCCTTGGG (Motif 19)

A C T G A G C T A C G T G T C A A C G T A C G T A G T C A G T C C G A T C G A T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A C G T A A C T G A C T G G T C A C G T A A C G T C G T A C T G A A G T C
p-value:1e-10
log p-value:-2.446e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.2 +/- 13.3bp
Average Position of motif in Background43.8 +/- 5.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTTATTCCTTGGG---
----TCCCCTGGGGAC
 A C T G A G C T A C G T G T C A A C G T A C G T A G T C A G T C C G A T C G A T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTTATTCCTTGGG---
----TCCCNNGGGACN
 A C T G A G C T A C G T G T C A A C G T A C G T A G T C A G T C C G A T C G A T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

EBF1/MA0154.3/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTTATTCCTTGGG---
--ANTCCCTNGGGAAT
 A C T G A G C T A C G T G T C A A C G T A C G T A G T C A G T C C G A T C G A T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTTATTCCTTGGG
-GCATTCCAGN--
 A C T G A G C T A C G T G T C A A C G T A C G T A G T C A G T C C G A T C G A T A C T G A C T G A C T G
A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTTATTCCTTGGG
NYTAATCCYB---
 A C T G A G C T A C G T G T C A A C G T A C G T A G T C A G T C C G A T C G A T A C T G A C T G A C T G
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GTTATTCCTTGGG
NNNTGTTGTTGTTNG--
 A C G T A C G T A C G T A C G T A C T G A G C T A C G T G T C A A C G T A C G T A G T C A G T C C G A T C G A T A C T G A C T G A C T G
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GTTATTCCTTGGG
NCNTTTGTTATTTNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C G T G T C A A C G T A C G T A G T C A G T C C G A T C G A T A C T G A C T G A C T G
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GTTATTCCTTGGG
-TTAATCCT----
 A C T G A G C T A C G T G T C A A C G T A C G T A G T C A G T C C G A T C G A T A C T G A C T G A C T G
A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GTTATTCCTTGGG
AATCGTTAATCCCTTTA
 A C G T A C G T A C G T A C G T A C T G A G C T A C G T G T C A A C G T A C G T A G T C A G T C C G A T C G A T A C T G A C T G A C T G
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GTTATTCCTTGGG
GCTAATCC-----
 A C T G A G C T A C G T G T C A A C G T A C G T A G T C A G T C C G A T C G A T A C T G A C T G A C T G
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T