Information for 9-HTGCAAAGCASAT (Motif 13)

G A T C C G A T A C T G T A G C C G T A C T G A C T G A C A T G A T G C C G T A A T C G G T C A A G C T
Reverse Opposite:
T C G A C A G T A T G C A C G T A T C G G T A C A G C T A G C T A C G T A T C G A G T C C G T A C T A G
p-value:1e-11
log p-value:-2.676e+01
Information Content per bp:1.701
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.30%
Number of Background Sequences with motif308.7
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets53.5 +/- 24.9bp
Average Position of motif in Background47.7 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-HTGCAAAGCASAT
WATGCAAATGAG--
 A C G T G A T C C G A T A C T G T A G C C G T A C T G A C T G A C A T G A T G C C G T A A T C G G T C A A G C T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--HTGCAAAGCASAT
ATATGCAAATNNN--
 A C G T A C G T G A T C C G A T A C T G T A G C C G T A C T G A C T G A C A T G A T G C C G T A A T C G G T C A A G C T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-HTGCAAAGCASAT
TATGCWAATBAV--
 A C G T G A T C C G A T A C T G T A G C C G T A C T G A C T G A C A T G A T G C C G T A A T C G G T C A A G C T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----HTGCAAAGCASAT
TTGTATGCAAATTAGA-
 A C G T A C G T A C G T A C G T G A T C C G A T A C T G T A G C C G T A C T G A C T G A C A T G A T G C C G T A A T C G G T C A A G C T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----HTGCAAAGCASAT
TTGTATGCAAATTAGA-
 A C G T A C G T A C G T A C G T G A T C C G A T A C T G T A G C C G T A C T G A C T G A C A T G A T G C C G T A A T C G G T C A A G C T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----HTGCAAAGCASAT
TTGTATGCAAATTAGA-
 A C G T A C G T A C G T A C G T G A T C C G A T A C T G T A G C C G T A C T G A C T G A C A T G A T G C C G T A A T C G G T C A A G C T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--HTGCAAAGCASAT
TTATGCAAAT-----
 A C G T A C G T G A T C C G A T A C T G T A G C C G T A C T G A C T G A C A T G A T G C C G T A A T C G G T C A A G C T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--HTGCAAAGCASAT
ATATGCAAAT-----
 A C G T A C G T G A T C C G A T A C T G T A G C C G T A C T G A C T G A C A T G A T G C C G T A A T C G G T C A A G C T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---HTGCAAAGCASAT
AATATGCAAATTAG--
 A C G T A C G T A C G T G A T C C G A T A C T G T A G C C G T A C T G A C T G A C A T G A T G C C G T A A T C G G T C A A G C T
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:HTGCAAAGCASAT
---NAAACCACAG
 G A T C C G A T A C T G T A G C C G T A C T G A C T G A C A T G A T G C C G T A A T C G G T C A A G C T
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G