Information for 3-CACAGCTCCCTCTGCT (Motif 4)

A G T C G C T A A T G C C G T A A C T G A G T C C G A T A G T C A G T C A G T C A C G T A G T C A C G T A T C G A G T C C G A T
Reverse Opposite:
C G T A A C T G A T G C C G T A A C T G C G T A A C T G A C T G A C T G C G T A A C T G A G T C A C G T A T C G C A G T A C T G
p-value:1e-15
log p-value:-3.639e+01
Information Content per bp:1.887
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.9 +/- 20.9bp
Average Position of motif in Background39.4 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CACAGCTCCCTCTGCT---
CNNBRGCGCCCCCTGSTGGC
 A C G T A G T C G C T A A T G C C G T A A C T G A G T C C G A T A G T C A G T C A G T C A C G T A G T C A C G T A T C G A G T C C G A T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CACAGCTCCCTCTGCT-----
--TAGCGCCCCCTGGTGGCCA
 A G T C G C T A A T G C C G T A A C T G A G T C C G A T A G T C A G T C A G T C A C G T A G T C A C G T A T C G A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CACAGCTCCCTCTGCT
----GCTCCG------
 A G T C G C T A A T G C C G T A A C T G A G T C C G A T A G T C A G T C A G T C A C G T A G T C A C G T A T C G A G T C C G A T
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CACAGCTCCCTCTGCT-----
-ANAGTGCCACCTGGTGGCCA
 A G T C G C T A A T G C C G T A A C T G A G T C C G A T A G T C A G T C A G T C A C G T A G T C A C G T A T C G A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CACAGCTCCCTCTGCT
------ACCATCTGTT
 A G T C G C T A A T G C C G T A A C T G A G T C C G A T A G T C A G T C A G T C A C G T A G T C A C G T A T C G A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CACAGCTCCCTCTGCT
------GCCATCTGTT
 A G T C G C T A A T G C C G T A A C T G A G T C C G A T A G T C A G T C A G T C A C G T A G T C A C G T A T C G A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CACAGCTCCCTCTGCT
CACAGN----------
 A G T C G C T A A T G C C G T A A C T G A G T C C G A T A G T C A G T C A G T C A C G T A G T C A C G T A T C G A G T C C G A T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CACAGCTCCCTCTGCT
CNGTCCTCCC------
 A G T C G C T A A T G C C G T A A C T G A G T C C G A T A G T C A G T C A G T C A C G T A G T C A C G T A T C G A G T C C G A T
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CACAGCTCCCTCTGCT
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A G T C G C T A A T G C C G T A A C T G A G T C C G A T A G T C A G T C A G T C A C G T A G T C A C G T A T C G A G T C C G A T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CACAGCTCCCTCTGCT
CCCCCGCCCCCGCC---
 A C G T A G T C G C T A A T G C C G T A A C T G A G T C C G A T A G T C A G T C A G T C A C G T A G T C A C G T A T C G A G T C C G A T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T A C G T