Information for 11-TCAGATGCTGYCA (Motif 21)

A C G T G T A C G T C A T A C G C T G A A G C T A T C G A T G C C G A T T A C G A G T C T G A C G C T A
Reverse Opposite:
C G A T A C T G T C A G A T G C C G T A T A C G A T G C T C G A A G C T A T G C C A G T A C T G T G C A
p-value:1e-9
log p-value:-2.118e+01
Information Content per bp:1.670
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.16%
Number of Background Sequences with motif359.4
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets52.0 +/- 27.1bp
Average Position of motif in Background50.0 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.70
Offset:6
Orientation:reverse strand
Alignment:TCAGATGCTGYCA-
------GCTGTCAA
 A C G T G T A C G T C A T A C G C T G A A G C T A T C G A T G C C G A T T A C G A G T C T G A C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TCAGATGCTGYCA-
------CCTGTCAA
 A C G T G T A C G T C A T A C G C T G A A G C T A T C G A T G C C G A T T A C G A G T C T G A C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TCAGATGCTGYCA--
-----VGCTGWCAVB
 A C G T G T A C G T C A T A C G C T G A A G C T A T C G A T G C C G A T T A C G A G T C T G A C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCAGATGCTGYCA-----
-NNNCAGCTGTCAATATN
 A C G T G T A C G T C A T A C G C T G A A G C T A T C G A T G C C G A T T A C G A G T C T G A C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCAGATGCTGYCA----
-AAGCACCTGTCAATAT
 A C G T G T A C G T C A T A C G C T G A A G C T A T C G A T G C C G A T T A C G A G T C T G A C G C T A A C G T A C G T A C G T A C G T
A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TCAGATGCTGYCA-
-------NTGTCAN
 A C G T G T A C G T C A T A C G C T G A A G C T A T C G A T G C C G A T T A C G A G T C T G A C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCAGATGCTGYCA----
-AATTACCTGTCAATAC
 A C G T G T A C G T C A T A C G C T G A A G C T A T C G A T G C C G A T T A C G A G T C T G A C G C T A A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TCAGATGCTGYCA-
------CTTGGCAA
 A C G T G T A C G T C A T A C G C T G A A G C T A T C G A T G C C G A T T A C G A G T C T G A C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCAGATGCTGYCA----
-AACTAGCTGTCAATAC
 A C G T G T A C G T C A T A C G C T G A A G C T A T C G A T G C C G A T T A C G A G T C T G A C G C T A A C G T A C G T A C G T A C G T
A C G T G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TCAGATGCTGYCA-
------RHTGWCAR
 A C G T G T A C G T C A T A C G C T G A A G C T A T C G A T G C C G A T T A C G A G T C T G A C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A