Information for 10-CTTGGCCAGTTCC (Motif 18)

A G T C A C G T A G C T A C T G A C T G A G T C A G T C C G T A A C T G A G C T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C T G A A G T C A C G T C T A G A C T G A G T C A G T C T C G A G T C A A C T G
p-value:1e-10
log p-value:-2.390e+01
Information Content per bp:1.856
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.3 +/- 24.6bp
Average Position of motif in Background47.1 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HES7/MA0822.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTTGGCCAGTTCC-
--TGGCACGTGCCA
 A G T C A C G T A G C T A C T G A C T G A G T C A G T C C G T A A C T G A G C T A C G T A G T C A G T C A C G T
A C G T A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

HES5/MA0821.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTTGGCCAGTTCC-
--CGGCACGTGCCA
 A G T C A C G T A G C T A C T G A C T G A G T C A G T C C G T A A C T G A G C T A C G T A G T C A G T C A C G T
A C G T A C G T G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------CTTGGCCAGTTCC
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G C T A C T G A C T G A G T C A G T C C G T A A C T G A G C T A C G T A G T C A G T C
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:4
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------CTTGGCCAGTTCC
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G C T A C T G A C T G A G T C A G T C C G T A A C T G A G C T A C G T A G T C A G T C
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTTGGCCAGTTCC
CTAGGCCT-----
 A G T C A C G T A G C T A C T G A C T G A G T C A G T C C G T A A C T G A G C T A C G T A G T C A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTTGGCCAGTTCC
-AAGGCAAGTGT-
 A G T C A C G T A G C T A C T G A C T G A G T C A G T C C G T A A C T G A G C T A C G T A G T C A G T C
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTTGGCCAGTTCC
NTTGGCANN----
 A G T C A C G T A G C T A C T G A C T G A G T C A G T C C G T A A C T G A G C T A C G T A G T C A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTTGGCCAGTTCC
-TTGGCA------
 A G T C A C G T A G C T A C T G A C T G A G T C A G T C C G T A A C T G A G C T A C G T A G T C A G T C
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CTTGGCCAGTTCC
GGGGCCGAGGCCTG----
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G C T A C T G A C T G A G T C A G T C C G T A A C T G A G C T A C G T A G T C A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CTTGGCCAGTTCC--
---GGCCACRCCCMK
 A G T C A C G T A G C T A C T G A C T G A G T C A G T C C G T A A C T G A G C T A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G