Information for 6-ACHTTTGACTAAT (Motif 7)

C T G A A G T C G C T A A C G T A G C T A C G T A C T G T C G A T G A C C G A T G T C A C G T A C G A T
Reverse Opposite:
C G T A A C G T A C G T C G T A A C T G A G C T A G T C C G T A T C G A G T C A C G A T A C T G G A C T
p-value:1e-13
log p-value:-3.154e+01
Information Content per bp:1.762
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif23.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets47.2 +/- 21.3bp
Average Position of motif in Background56.6 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:ACHTTTGACTAAT----
-----TGATTRATGGCY
 C T G A A G T C G C T A A C G T A G C T A C G T A C T G T C G A T G A C C G A T G T C A C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:ACHTTTGACTAAT--
-----TGATTGATGA
 C T G A A G T C G C T A A C G T A G C T A C G T A C T G T C G A T G A C C G A T G T C A C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACHTTTGACTAAT---
-ACCGTGACTAATTNN
 C T G A A G T C G C T A A C G T A G C T A C G T A C T G T C G A T G A C C G A T G T C A C G T A C G A T A C G T A C G T A C G T
A C G T C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ACHTTTGACTAAT--
---DATGASTCATNN
 C T G A A G T C G C T A A C G T A G C T A C G T A C T G T C G A T G A C C G A T G T C A C G T A C G A T A C G T A C G T
A C G T A C G T A C G T C A T G T C G A C G A T C A T G G C T A T A G C C G A T G T A C G C T A A G C T G A T C T G A C

FOS::JUN/MA0099.2/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:forward strand
Alignment:ACHTTTGACTAAT
-----TGACTCA-
 C T G A A G T C G C T A A C G T A G C T A C G T A C T G T C G A T G A C C G A T G T C A C G T A C G A T
A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACHTTTGACTAAT
NAACATCTGGATN--
 A C G T A C G T C T G A A G T C G C T A A C G T A G C T A C G T A C T G T C G A T G A C C G A T G T C A C G T A C G A T
T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACHTTTGACTAAT---
-CAATTGCAAAAATAT
 C T G A A G T C G C T A A C G T A G C T A C G T A C T G T C G A T G A C C G A T G T C A C G T A C G A T A C G T A C G T A C G T
A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

FOS/MA0476.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACHTTTGACTAAT-
---TGTGACTCATT
 C T G A A G T C G C T A A C G T A G C T A C G T A C T G T C G A T G A C C G A T G T C A C G T A C G A T A C G T
A C G T A C G T A C G T C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T

PH0148.1_Pou3f3/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACHTTTGACTAAT---
AAAATATGCATAATAAA
 A C G T C T G A A G T C G C T A A C G T A G C T A C G T A C T G T C G A T G A C C G A T G T C A C G T A C G A T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

POU2F1/MA0785.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACHTTTGACTAAT
-AATTTGCATANT
 C T G A A G T C G C T A A C G T A G C T A C G T A C T G T C G A T G A C C G A T G T C A C G T A C G A T
A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T