Information for 17-TGTGCATTTG (Motif 23)

A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A A C G T A C T G A G T C C G T A A G T C C G T A
p-value:1e-3
log p-value:-8.635e+00
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif15.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets68.2 +/- 32.3bp
Average Position of motif in Background48.5 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TGTGCATTTG
NNTGTGGATTSS
 A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C T G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGTGCATTTG-
TGTGGATTNNN
 A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C T G A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TGTGCATTTG
TTCATTTGCATAT-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C T G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGTGCATTTG
ATTTGCATAT-
 A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C T G
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGTGCATTTG
ATTTGCATAA-
 A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C T G
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGCATTTG--
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C T G A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGCATTTG--
NNGTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C T G A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGCATTTG
NNNNTTGTGTGCTTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C T G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGTGCATTTG-
---CCATATGT
 A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C T G A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

CEBPA/MA0102.3/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGTGCATTTG
NATTGTGCAAT--
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C T G
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T