Information for 15-GGGCCAATCA (Motif 20)

A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C G T A C G T A C T G A C T G A G T C A G T C A G T C
p-value:1e-5
log p-value:-1.217e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.5 +/- 18.2bp
Average Position of motif in Background68.0 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----GGGCCAATCA-
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GGGCCAATCA-
-AGCCAATCGG
 A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GGGCCAATCA
ACTAGCCAATCA
 A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GGGCCAATCA-------
TGGACCAATCAGCACTCT
 A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.77
Offset:3
Orientation:forward strand
Alignment:GGGCCAATCA-
---CCAATCAA
 A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGGCCAATCA------
CGACCCAATCAACGGTG
 A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GGGCCAATCA---
---CAAATCACTG
 A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGGCCAATCA-
SCTGTCAVTCAV
 A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGGCCAATCA
-TGCCAA---
 A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGCCAATCA
CGTGCCAAG--
 A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T