Information for 8-CACTGGCCAGTGT (Motif 13)

A G T C C G T A A T G C C A G T A C T G A C T G A G T C A G T C C G T A C A T G A C G T A C T G C G A T
Reverse Opposite:
C G T A A G T C G T C A G A T C A C G T A C T G A C T G T G A C A G T C G C T A T A C G A C G T A C T G
p-value:1e-9
log p-value:-2.224e+01
Information Content per bp:1.812
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.1 +/- 21.0bp
Average Position of motif in Background49.9 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX8/MA0868.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CACTGGCCAGTGT-
AACAATGTGCAGTGTT
 A C G T A C G T A G T C C G T A A T G C C A G T A C T G A C T G A G T C A G T C C G T A C A T G A C G T A C T G C G A T A C G T
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CACTGGCCAGTGT
---TGCCCAGNHW
 A G T C C G T A A T G C C A G T A C T G A C T G A G T C A G T C C G T A C A T G A C G T A C T G C G A T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CACTGGCCAGTGT---
------CCATTGTTYB
 A G T C C G T A A T G C C A G T A C T G A C T G A G T C A G T C C G T A C A T G A C G T A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CACTGGCCAGTGT-
------CCTTTGTT
 A G T C C G T A A T G C C A G T A C T G A C T G A G T C A G T C C G T A C A T G A C G T A C T G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CACTGGCCAGTGT------
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A G T C C G T A A T G C C A G T A C T G A C T G A G T C A G T C C G T A C A T G A C G T A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CACTGGCCAGTGT--
-----NCCATTGTTC
 A G T C C G T A A T G C C A G T A C T G A C T G A G T C A G T C C G T A C A T G A C G T A C T G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CACTGGCCAGTGT
CANAGNNCAAAGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C A G T A C T G A C T G A G T C A G T C C G T A C A T G A C G T A C T G C G A T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CACTGGCCAGTGT
-ACTAGCCAATCA
 A G T C C G T A A T G C C A G T A C T G A C T G A G T C A G T C C G T A C A T G A C G T A C T G C G A T
A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CACTGGCCAGTGT--
------CCATTGTTC
 A G T C C G T A A T G C C A G T A C T G A C T G A G T C A G T C C G T A C A T G A C G T A C T G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CACTGGCCAGTGT
AGAGTCCAAAGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C A G T A C T G A C T G A G T C A G T C C G T A C A T G A C G T A C T G C G A T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T