Information for 12-AGCACTTTGT (Motif 24)

C G T A T A C G A G T C C G T A A G T C C G A T C G A T A C G T A C T G A C G T
Reverse Opposite:
G T C A A G T C C G T A C G T A C G T A A C T G A C G T A C T G A T G C A C G T
p-value:1e-7
log p-value:-1.835e+01
Information Content per bp:1.856
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif98.3
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets53.2 +/- 32.4bp
Average Position of motif in Background55.1 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.70
Offset:4
Orientation:forward strand
Alignment:AGCACTTTGT
----CTTTGT
 C G T A T A C G A G T C C G T A A G T C C G A T C G A T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------AGCACTTTGT-
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G A G T C C G T A A G T C C G A T C G A T A C G T A C T G A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGCACTTTGT
MRSCACTYAA-
 A C G T C G T A T A C G A G T C C G T A A G T C C G A T C G A T A C G T A C T G A C G T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGCACTTTGT
AAGCACTTAA-
 A C G T C G T A T A C G A G T C C G T A A G T C C G A T C G A T A C G T A C T G A C G T
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGCACTTTGT
AGGVNCCTTTGT
 A C G T A C G T C G T A T A C G A G T C C G T A A G T C C G A T C G A T A C G T A C T G A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AGCACTTTGT---
---CCWTTGTYYB
 C G T A T A C G A G T C C G T A A G T C C G A T C G A T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

MAX::MYC/MA0059.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCACTTTGT
GACCACGTGGT
 A C G T C G T A T A C G A G T C C G T A A G T C C G A T C G A T A C G T A C T G A C G T
C T A G C T G A T A C G G T A C C G T A A G T C C T A G A G C T A C T G A C T G G A C T

Myc/MA0147.2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGCACTTTGT
AAGCACATGG-
 A C G T C G T A T A C G A G T C C G T A A G T C C G A T C G A T A C G T A C T G A C G T
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGCACTTTGT--
AAGAACATWHTGTTC
 A C G T A C G T A C G T C G T A T A C G A G T C C G T A A G T C C G A T C G A T A C G T A C T G A C G T A C G T A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGCACTTTGT---
---YCTTTGTTCC
 C G T A T A C G A G T C C G T A A G T C C G A T C G A T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C