Information for 12-CTGCCTGGCAGGG (Motif 19)

G T A C C G A T A T C G A G T C A G T C C G A T A C T G A C T G A G T C C G T A A C T G C T A G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G A T A C T G A G T C A G T C C G T A A C T G A C T G T A G C C G T A A C T G
p-value:1e-8
log p-value:-1.921e+01
Information Content per bp:1.843
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif63.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets46.6 +/- 21.3bp
Average Position of motif in Background56.8 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTGCCTGGCAGGG-
GGGGCTYGKCTGGGA
 A C G T G T A C C G A T A T C G A G T C A G T C C G A T A C T G A C T G A G T C C G T A A C T G C T A G A C T G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTGCCTGGCAGGG
---CTTGGCAA--
 G T A C C G A T A T C G A G T C A G T C C G A T A C T G A C T G A G T C C G T A A C T G C T A G A C T G
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTGCCTGGCAGGG----------
---YCAGGCWCAGTACCAGGCTC
 G T A C C G A T A T C G A G T C A G T C C G A T A C T G A C T G A G T C C G T A A C T G C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGCCTGGCAGGG----
NAGANTGGCGGGGNGNA
 G T A C C G A T A T C G A G T C A G T C C G A T A C T G A C T G A G T C C G T A A C T G C T A G A C T G A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTGCCTGGCAGGG
GTCATGCHTGRCTGS-
 A C G T A C G T A C G T G T A C C G A T A T C G A G T C A G T C C G A T A C T G A C T G A G T C C G T A A C T G C T A G A C T G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGCCTGGCAGGG
NCTTCCNGGAAGNN
 A C G T G T A C C G A T A T C G A G T C A G T C C G A T A C T G A C T G A G T C C G T A A C T G C T A G A C T G
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGCCTGGCAGGG
-TTCCNGGAAG--
 G T A C C G A T A T C G A G T C A G T C C G A T A C T G A C T G A G T C C G T A A C T G C T A G A C T G
A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTGCCTGGCAGGG
---NTTGGCANN-
 G T A C C G A T A T C G A G T C A G T C C G A T A C T G A C T G A G T C C G T A A C T G C T A G A C T G
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CTGCCTGGCAGGG
----TTGGCA---
 G T A C C G A T A T C G A G T C A G T C C G A T A C T G A C T G A G T C C G T A A C T G C T A G A C T G
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CTGCCTGGCAGGG-
----CCTGCTGAGH
 G T A C C G A T A T C G A G T C A G T C C G A T A C T G A C T G A G T C C G T A A C T G C T A G A C T G A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A