Information for 7-AAAGCCACAT (Motif 13)

C T G A C G T A C G T A T C A G G T A C G T A C G T C A A G T C C G T A C A G T
Reverse Opposite:
G T C A C G A T T C A G A C G T A C T G A C T G A G T C C G A T A C G T A G C T
p-value:1e-10
log p-value:-2.345e+01
Information Content per bp:1.829
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif195.4
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets52.0 +/- 24.4bp
Average Position of motif in Background47.8 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AAAGCCACAT-
-AAACCACANN
 C T G A C G T A C G T A T C A G G T A C G T A C G T C A A G T C C G T A C A G T A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AAAGCCACAT--
-AAACCACAGAN
 C T G A C G T A C G T A T C A G G T A C G T A C G T C A A G T C C G T A C A G T A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAAGCCACAT--
NWAACCACADNN
 C T G A C G T A C G T A T C A G G T A C G T A C G T C A A G T C C G T A C A G T A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAAGCCACAT
TCCAATCCACA-
 A C G T A C G T C T G A C G T A C G T A T C A G G T A C G T A C G T C A A G T C C G T A C A G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AAAGCCACAT-
SSAATCCACANN
 A C G T C T G A C G T A C G T A T C A G G T A C G T A C G T C A A G T C C G T A C A G T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AAAGCCACAT
NAAACCACAG
 C T G A C G T A C G T A T C A G G T A C G T A C G T C A A G T C C G T A C A G T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AAAGCCACAT-
-AAACCACAGC
 C T G A C G T A C G T A T C A G G T A C G T A C G T C A A G T C C G T A C A G T A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAAGCCACAT-
-ATGCCAGACN
 C T G A C G T A C G T A T C A G G T A C G T A C G T C A A G T C C G T A C A G T A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAAGCCACAT-
-AAACCGCAAA
 C T G A C G T A C G T A T C A G G T A C G T A C G T C A A G T C C G T A C A G T A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

Myc/MA0147.2/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAAGCCACAT--
--AAGCACATGG
 C T G A C G T A C G T A T C A G G T A C G T A C G T C A A G T C C G T A C A G T A C G T A C G T
A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G