Information for 13-CATGATTAGA (Motif 15)

A G T C G T C A A C G T C T A G C T G A C G A T A C G T C T G A C A T G C G T A
Reverse Opposite:
A C G T G T A C G A C T G T C A C G T A A G C T A G T C C G T A A C G T C T A G
p-value:1e-8
log p-value:-1.896e+01
Information Content per bp:1.835
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif173.0
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets55.1 +/- 27.2bp
Average Position of motif in Background50.3 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DUXA/MA0884.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CATGATTAGA----
-NTGATTAAATTAN
 A G T C G T C A A C G T C T A G C T G A C G A T A C G T C T G A C A T G C G T A A C G T A C G T A C G T A C G T
A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

EVX2/MA0888.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CATGATTAGA
GGTAATTAGC
 A G T C G T C A A C G T C T A G C T G A C G A T A C G T C T G A C A T G C G T A
T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C

EVX1/MA0887.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CATGATTAGA
GGTAATTAGC
 A G T C G T C A A C G T C T A G C T G A C G A T A C G T C T G A C A T G C G T A
T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CATGATTAGA
-RGGATTAR-
 A G T C G T C A A C G T C T A G C T G A C G A T A C G T C T G A C A T G C G T A
A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T

DUX4/MA0468.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CATGATTAGA---
--TGATTAAATTA
 A G T C G T C A A C G T C T A G C T G A C G A T A C G T C T G A C A T G C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CATGATTAGA
-TTGATTGN-
 A G T C G T C A A C G T C T A G C T G A C G A T A C G T C T G A C A T G C G T A
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

VSX2/MA0726.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CATGATTAGA
-NTAATTAG-
 A G T C G T C A A C G T C T A G C T G A C G A T A C G T C T G A C A T G C G T A
A C G T T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G A C G T

VAX1/MA0722.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CATGATTAGA
-NTAATTAG-
 A G T C G T C A A C G T C T A G C T G A C G A T A C G T C T G A C A T G C G T A
A C G T C T A G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A C G T

VSX1/MA0725.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CATGATTAGA
-NTAATTAG-
 A G T C G T C A A C G T C T A G C T G A C G A T A C G T C T G A C A T G C G T A
A C G T T G C A G A C T G T C A C T G A A G C T C A G T C T G A C T A G A C G T

Lhx8/MA0705.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CATGATTAGA
-CTAATTAG-
 A G T C G T C A A C G T C T A G C T G A C G A T A C G T C T G A C A T G C G T A
A C G T A G T C A G C T T C G A C G T A A C G T A G C T C T G A T C A G A C G T