Homer de novo Motif Results (hs_neuroblastoma_SKNSH_cancer_CTCF_SRX100378_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 866
Total background sequences = 47668
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T A G G A T C G T A C G C T A A T G C G A C T C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T G A A T G C A G C T 1e-561-1.294e+0356.81%2.22%12.6bp (29.3bp)CTCF/MA0139.1/Jaspar(0.971)
More Information | Similar Motifs Found
motif file (matrix)
2 A C G T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A A G T C A G T C C G A T A T C G A C G T A C T G 1e-15-3.662e+010.81%0.00%9.1bp (0.0bp)HIC2/MA0738.1/Jaspar(0.622)
More Information | Similar Motifs Found
motif file (matrix)
3 A G T C A G T C A G T C C A G T A G T C A C G T A C T G G A C T A G T C A C T G 1e-15-3.464e+012.54%0.24%18.5bp (26.7bp)NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer(0.671)
More Information | Similar Motifs Found
motif file (matrix)
4 A C T G A C T G G C T A C T G A G T C A G T A C A C G T C T A G A G T C C G T A A C T G C T A G A G T C 1e-14-3.451e+011.04%0.01%20.0bp (10.9bp)LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer(0.607)
More Information | Similar Motifs Found
motif file (matrix)
5 C G T A A C T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A T C G A G T C A C G T C T A G A C G T A T C G G C T A 1e-13-3.066e+010.69%0.00%21.8bp (0.0bp)ZIC1/MA0696.1/Jaspar(0.663)
More Information | Similar Motifs Found
motif file (matrix)
6 G T C A G T C A A C T G A T C G A T C G G T A C T C A G A T G C A G T C A G T C 1e-12-2.976e+012.42%0.27%23.4bp (28.4bp)PB0052.1_Plagl1_1/Jaspar(0.799)
More Information | Similar Motifs Found
motif file (matrix)
7 A C T G C G T A A C T G A T C G C T G A A G C T A C G T G C A T C G A T A T C G 1e-12-2.871e+012.66%0.36%26.8bp (30.7bp)Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer(0.610)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C G T A C T G A T G C A G T C A G T C A C G T A C T G G T C A A G T C G T C A C G T A G A T C A G T C A G T C A T C G A C T G 1e-10-2.485e+010.58%0.00%17.7bp (15.9bp)X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.627)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C G T C T G A A C T G C G T A C T A G A C G T A C G T A C G T A T C G A T G C A C G T A C G T A G T C 1e-10-2.410e+010.69%0.01%26.9bp (10.3bp)ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer(0.639)
More Information | Similar Motifs Found
motif file (matrix)
10 * A G T C A C G T A G T C C G T A C G T A A G T C C G T A A T G C A C G T A C T G 1e-9-2.203e+011.15%0.06%15.5bp (33.0bp)Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer(0.631)
More Information | Similar Motifs Found
motif file (matrix)
11 * C T A G C T G A A G T C T C G A A C G T A T C G G T C A T G C A G T C A C G T A 1e-7-1.788e+011.62%0.22%30.3bp (27.8bp)POU2F2/MA0507.1/Jaspar(0.641)
More Information | Similar Motifs Found
motif file (matrix)
12 * A G T C A G T C A C G T A G T C A G T C A C T G A C T G A C T G A C G T A C G T 1e-6-1.486e+010.46%0.01%9.0bp (18.3bp)ELF1/MA0473.2/Jaspar(0.780)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C G T A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C G T C G T A 1e-5-1.373e+010.46%0.01%25.8bp (19.9bp)Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.665)
More Information | Similar Motifs Found
motif file (matrix)