Information for 14-TSTCTGCMARCAG (Motif 20)

A C G T A T G C A C G T G T A C A C G T A C T G G T A C T G A C C T G A C T G A A T G C C T G A C T A G
Reverse Opposite:
A G T C A G C T T A C G G A C T A G C T A C T G A C T G G T A C C G T A A C T G G T C A T A C G T C G A
p-value:1e-9
log p-value:-2.146e+01
Information Content per bp:1.725
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif40.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets59.7 +/- 23.5bp
Average Position of motif in Background45.0 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TSTCTGCMARCAG-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A T G C A C G T G T A C A C G T A C T G G T A C T G A C C T G A C T G A A T G C C T G A C T A G A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TSTCTGCMARCAG
-----GTAAACAG
 A C G T A T G C A C G T G T A C A C G T A C T G G T A C T G A C C T G A C T G A A T G C C T G A C T A G
A C G T A C G T A C G T A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G

Foxo1/MA0480.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TSTCTGCMARCAG--
----TGTAAACAGGA
 A C G T A T G C A C G T G T A C A C G T A C T G G T A C T G A C C T G A C T G A A T G C C T G A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TSTCTGCMARCAG
---TTGCCAAG--
 A C G T A T G C A C G T G T A C A C G T A C T G G T A C T G A C C T G A C T G A A T G C C T G A C T A G
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TSTCTGCMARCAG-
--SCTGTCARCACC
 A C G T A T G C A C G T G T A C A C G T A C T G G T A C T G A C C T G A C T G A A T G C C T G A C T A G A C G T
A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TSTCTGCMARCAG
--GGTGCCAAGT-
 A C G T A T G C A C G T G T A C A C G T A C T G G T A C T G A C C T G A C T G A A T G C C T G A C T A G
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TSTCTGCMARCAG-
--TATGTAAACANG
 A C G T A T G C A C G T G T A C A C G T A C T G G T A C T G A C C T G A C T G A A T G C C T G A C T A G A C G T
A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TSTCTGCMARCAG
---ATGCCAACC-
 A C G T A T G C A C G T G T A C A C G T A C T G G T A C T G A C C T G A C T G A A T G C C T G A C T A G
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TSTCTGCMARCAG
TGTCTGDCACCT-
 A C G T A T G C A C G T G T A C A C G T A C T G G T A C T G A C C T G A C T G A A T G C C T G A C T A G
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TSTCTGCMARCAG
CTGTCTGTCACCT-
 A C G T A C G T A T G C A C G T G T A C A C G T A C T G G T A C T G A C C T G A C T G A A T G C C T G A C T A G
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T