Information for 8-AATTTAATTA (Motif 10)

G T C A C T G A G A C T A C G T G C A T T C G A C T G A A G C T A C G T C T G A
Reverse Opposite:
A G C T G T C A C T G A G A C T A G C T C G T A T G C A C T G A A G C T C A G T
p-value:1e-11
log p-value:-2.695e+01
Information Content per bp:1.631
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif7.13%
Number of Background Sequences with motif1234.8
Percentage of Background Sequences with motif2.61%
Average Position of motif in Targets51.1 +/- 26.4bp
Average Position of motif in Background51.1 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PHOX2A/MA0713.1/Jaspar

Match Rank:1
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-AATTTAATTA
TAATTTAATTA
 A C G T G T C A C T G A G A C T A C G T G C A T T C G A C T G A A G C T A C G T C T G A
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

Phox2b/MA0681.1/Jaspar

Match Rank:2
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-AATTTAATTA
TAATTTAATTA
 A C G T G T C A C T G A G A C T A C G T G C A T T C G A C T G A A G C T A C G T C T G A
G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:3
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--AATTTAATTA
NTAATBNAATTA
 A C G T A C G T G T C A C T G A G A C T A C G T G C A T T C G A C T G A A G C T A C G T C T G A
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A

PROP1/MA0715.1/Jaspar

Match Rank:4
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-AATTTAATTA
TAATTTAATTA
 A C G T G T C A C T G A G A C T A C G T G C A T T C G A C T G A A G C T A C G T C T G A
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-AATTTAATTA-
TAATYNRATTAR
 A C G T G T C A C T G A G A C T A C G T G C A T T C G A C T G A A G C T A C G T C T G A A C G T
G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--AATTTAATTA
GTAATCDGATTA
 A C G T A C G T G T C A C T G A G A C T A C G T G C A T T C G A C T G A A G C T A C G T C T G A
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A

Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.83
Offset:1
Orientation:forward strand
Alignment:AATTTAATTA-
-ADBTAATTAR
 G T C A C T G A G A C T A C G T G C A T T C G A C T G A A G C T A C G T C T G A A C G T
A C G T C G T A C G T A A G C T G A C T T G C A G T C A A C G T A G C T C T G A T C A G

ALX3/MA0634.1/Jaspar

Match Rank:8
Score:0.80
Offset:2
Orientation:forward strand
Alignment:AATTTAATTA--
--TCTAATTAAA
 G T C A C T G A G A C T A C G T G C A T T C G A C T G A A G C T A C G T C T G A A C G T A C G T
A C G T A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A

Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer

Match Rank:9
Score:0.78
Offset:1
Orientation:forward strand
Alignment:AATTTAATTA-
-NNYTAATTAR
 G T C A C T G A G A C T A C G T G C A T T C G A C T G A A G C T A C G T C T G A A C G T
A C G T C G T A C A T G A G T C G A C T T G C A C G T A A C G T A C G T C T G A T C A G

Lhx4/MA0704.1/Jaspar

Match Rank:10
Score:0.78
Offset:3
Orientation:forward strand
Alignment:AATTTAATTA-
---TTAATTAA
 G T C A C T G A G A C T A C G T G C A T T C G A C T G A A G C T A C G T C T G A A C G T
A C G T A C G T A C G T A G C T G A C T T G C A C G T A A C G T A G C T C T G A T C G A