Information for 18-CASRCCCWTTGTGSGC (Motif 34)

A G T C C G T A A T C G C T A G A G T C A G T C A T G C C G T A A G C T C G A T A C T G A C G T A T C G A T G C A C T G A G T C
Reverse Opposite:
A C T G A G T C A T C G A T G C G T C A A G T C C G T A C T G A G C A T A T C G A C T G A C T G A G C T A T G C A C G T A C T G
p-value:1e-7
log p-value:-1.676e+01
Information Content per bp:1.869
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.5 +/- 24.5bp
Average Position of motif in Background63.6 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CASRCCCWTTGTGSGC
-----CCTTTGTT---
 A G T C C G T A A T C G C T A G A G T C A G T C A T G C C G T A A G C T C G A T A C T G A C G T A T C G A T G C A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CASRCCCWTTGTGSGC-
--NNNCCATTGTGTNAN
 A G T C C G T A A T C G C T A G A G T C A G T C A T G C C G T A A G C T C G A T A C T G A C G T A T C G A T G C A C T G A G T C A C G T
A C G T A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CASRCCCWTTGTGSGC
-----CCWTTGTYYB-
 A G T C C G T A A T C G C T A G A G T C A G T C A T G C C G T A A G C T C G A T A C T G A C G T A T C G A T G C A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CASRCCCWTTGTGSGC
-----CCWTTGTY---
 A G T C C G T A A T C G C T A G A G T C A G T C A T G C C G T A A G C T C G A T A C T G A C G T A T C G A T G C A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CASRCCCWTTGTGSGC
----NCCATTGTTC--
 A G T C C G T A A T C G C T A G A G T C A G T C A T G C C G T A A G C T C G A T A C T G A C G T A T C G A T G C A C T G A G T C
A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CASRCCCWTTGTGSGC-
TGTTCCCATTGTGTACT
 A G T C C G T A A T C G C T A G A G T C A G T C A T G C C G T A A G C T C G A T A C T G A C G T A T C G A T G C A C T G A G T C A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CASRCCCWTTGTGSGC
-----CCATTGTTYB-
 A G T C C G T A A T C G C T A G A G T C A G T C A T G C C G T A A G C T C G A T A C T G A C G T A T C G A T G C A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CASRCCCWTTGTGSGC
------CTTTGT----
 A G T C C G T A A T C G C T A G A G T C A G T C A T G C C G T A A G C T C G A T A C T G A C G T A T C G A T G C A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CASRCCCWTTGTGSGC
-----CCATTGTTNY-
 A G T C C G T A A T C G C T A G A G T C A G T C A T G C C G T A A G C T C G A T A C T G A C G T A T C G A T G C A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CASRCCCWTTGTGSGC
AGGVNCCTTTGT----
 A G T C C G T A A T C G C T A G A G T C A G T C A T G C C G T A A G C T C G A T A C T G A C G T A T C G A T G C A C T G A G T C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T