Information for 10-GATCRCGRAGMGW (Motif 13)

A C T G C G T A A C G T T A G C C T G A A G T C A C T G C T A G C G T A A C T G G T C A A C T G C G A T
Reverse Opposite:
C G T A G T A C A C G T A G T C C G A T G A T C A G T C A C T G A G C T A C T G C G T A A C G T A G T C
p-value:1e-11
log p-value:-2.724e+01
Information Content per bp:1.867
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 26.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GATCRCGRAGMGW
-----CGGAGC--
 A C T G C G T A A C G T T A G C C T G A A G T C A C T G C T A G C G T A A C T G G T C A A C T G C G A T
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GATCRCGRAGMGW---
AGGTCACGGAGAGGTCA
 A C G T A C T G C G T A A C G T T A G C C T G A A G T C A C T G C T A G C G T A A C T G G T C A A C T G C G A T A C G T A C G T A C G T
C T G A A C T G C A T G A C G T A T G C C T G A A G C T T A C G T C A G C T G A T A C G T C G A A C T G A C T G C A G T A T G C C G T A

PB0127.1_Gata6_2/Jaspar

Match Rank:3
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GATCRCGRAGMGW
GCGGCGATATCGCAGCG-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T T A G C C T G A A G T C A C T G C T A G C G T A A C T G G T C A A C T G C G A T
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GATCRCGRAGMGW
-----NGAAGC--
 A C T G C G T A A C G T T A G C C T G A A G T C A C T G C T A G C G T A A C T G G T C A A C T G C G A T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GATCRCGRAGMGW--
-GCCGCGCAGTGCGT
 A C T G C G T A A C G T T A G C C T G A A G T C A C T G C T A G C G T A A C T G G T C A A C T G C G A T A C G T A C G T
A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Atf3/MA0605.1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GATCRCGRAGMGW
GATGACGT-----
 A C T G C G T A A C G T T A G C C T G A A G T C A C T G C T A G C G T A A C T G G T C A A C T G C G A T
A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T A C G T A C G T A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GATCRCGRAGMGW
GGTCACGTGG---
 A C T G C G T A A C G T T A G C C T G A A G T C A C T G C T A G C G T A A C T G G T C A A C T G C G A T
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GATCRCGRAGMGW
GAATGACGAATAAC
 A C G T A C T G C G T A A C G T T A G C C T G A A G T C A C T G C T A G C G T A A C T G G T C A A C T G C G A T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GATCRCGRAGMGW
AGATAASR------
 A C G T A C T G C G T A A C G T T A G C C T G A A G T C A C T G C T A G C G T A A C T G G T C A A C T G C G A T
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GATCRCGRAGMGW
AGATAAGA------
 A C G T A C T G C G T A A C G T T A G C C T G A A G T C A C T G C T A G C G T A A C T G G T C A A C T G C G A T
G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T