Information for 7-RARTKCMTGGCCT (Motif 9)

C T G A G T C A C T G A A C G T A C T G A G T C G T A C A C G T A C T G A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C A G T C C G T A C A T G A C T G T G A C G T C A A G C T A C G T A G C T
p-value:1e-10
log p-value:-2.453e+01
Information Content per bp:1.870
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.4 +/- 26.6bp
Average Position of motif in Background52.3 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:RARTKCMTGGCCT
-----CNAGGCCT
 C T G A G T C A C T G A A C G T A C T G A G T C G T A C A C G T A C T G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:RARTKCMTGGCCT
-----CTAGGCCT
 C T G A G T C A C T G A A C G T A C T G A G T C G T A C A C G T A C T G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:RARTKCMTGGCCT--
-----BNTGDCCTTG
 C T G A G T C A C T G A A C G T A C T G A G T C G T A C A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:RARTKCMTGGCCT--
-------TGACCTYA
 C T G A G T C A C T G A A C G T A C T G A G T C G T A C A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:RARTKCMTGGCCT-
GGGGCCGAGGCCTG
 C T G A G T C A C T G A A C G T A C T G A G T C G T A C A C G T A C T G A C T G A G T C A G T C A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:RARTKCMTGGCCT---
------CTGACCTTTG
 C T G A G T C A C T G A A C G T A C T G A G T C G T A C A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:RARTKCMTGGCCT-
------GTGACCTT
 C T G A G T C A C T G A A C G T A C T G A G T C G T A C A C G T A C T G A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:RARTKCMTGGCCT
-RGTTAGTGCCCY
 C T G A G T C A C T G A A C G T A C T G A G T C G T A C A C G T A C T G A C T G A G T C A G T C A C G T
A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:RARTKCMTGGCCT
RCATTCCWGG---
 C T G A G T C A C T G A A C G T A C T G A G T C G T A C A C G T A C T G A C T G A G T C A G T C A C G T
C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:RARTKCMTGGCCT----
-------TGACCTTGAN
 C T G A G T C A C T G A A C G T A C T G A G T C G T A C A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A