Information for 6-TGCATTGAATTTC (Motif 8)

A C G T A C T G A G T C C G T A A C G T A C G T A C T G G T C A C G T A A C G T A C G T A C G T A T G C
Reverse Opposite:
A T C G C G T A G T C A C G T A A C G T A C G T A G T C C G T A C G T A C G A T C T A G A G T C C G T A
p-value:1e-10
log p-value:-2.512e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 26.8bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGCATTGAATTTC--
NNNTATTGAATTGNNN
 A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C T G G T C A C G T A A C G T A C G T A C G T A T G C A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TGCATTGAATTTC
NANTTCATTGAATTA-
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C T G G T C A C G T A A C G T A C G T A C G T A T G C
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGCATTGAATTTC----
-GGACTGAATTCATGCC
 A C G T A C T G A G T C C G T A A C G T A C G T A C T G G T C A C G T A A C G T A C G T A C G T A T G C A C G T A C G T A C G T A C G T
A C G T C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

ONECUT3/MA0757.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCATTGAATTTC-
NTTATTGATTTTTT
 A C G T A C T G A G T C C G T A A C G T A C G T A C T G G T C A C G T A A C G T A C G T A C G T A T G C A C G T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGCATTGAATTTC
NNNANTGCAGTGCNNTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C T G G T C A C G T A A C G T A C G T A C G T A T G C
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCATTGAATTTC
-GKMTCADRTTWC
 A C G T A C T G A G T C C G T A A C G T A C G T A C T G G T C A C G T A A C G T A C G T A C G T A T G C
A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGCATTGAATTTC-----
RTTKCADNNKRTTGCATNAN
 A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C T G G T C A C G T A A C G T A C G T A C G T A T G C A C G T A C G T A C G T A C G T A C G T
T C G A C G A T A C G T C A T G T A G C G C T A C A G T A G C T T G A C C A G T T C G A A G C T A C G T C A T G G T A C G T C A G C A T G C T A C G T A A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCATTGAATTTC
GGGATTGCATNN-
 A C G T A C T G A G T C C G T A A C G T A C G T A C T G G T C A C G T A A C G T A C G T A C G T A T G C
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGCATTGAATTTC---
TNAATTTTATTACCTN
 A C G T A C T G A G T C C G T A A C G T A C G T A C T G G T C A C G T A A C G T A C G T A C G T A T G C A C G T A C G T A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGCATTGAATTTC
NNCATTCATTCATNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C T G G T C A C G T A A C G T A C G T A C G T A T G C
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T