Information for 12-CTTTTAATTC (Motif 21)

A G T C A C G T A G C T A G C T A C G T C G T A C T G A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A G C T A C G T C G T A C T G A C T G A C G T A A C T G
p-value:1e-6
log p-value:-1.566e+01
Information Content per bp:1.927
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif33.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets51.7 +/- 32.2bp
Average Position of motif in Background51.1 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CTTTTAATTC
--TTTAAT--
 A G T C A C G T A G C T A G C T A C G T C G T A C T G A A C G T A C G T A G T C
A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CTTTTAATTC-
ATATTAATTAA
 A G T C A C G T A G C T A G C T A C G T C G T A C T G A A C G T A C G T A G T C A C G T
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

MNX1/MA0707.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTTTTAATTC--
--TTTAATTANN
 A G T C A C G T A G C T A G C T A C G T C G T A C T G A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T C A G T G C A T A C G T G C T A C T G A A C G T C A G T T C G A A T G C G A T C

PRRX1/MA0716.1/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CTTTTAATTC-
---NTAATTAN
 A G T C A C G T A G C T A G C T A C G T C G T A C T G A A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A G C T C G A T C T G A C T G A C A G T A G C T C T G A T C A G

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTAATTC-
ASTTTCACTTCC
 A C G T A G T C A C G T A G C T A G C T A C G T C G T A C T G A A C G T A C G T A G T C A C G T
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

Hoxd9/MA0913.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTTTTAATTC-
-TTTTTATTGC
 A G T C A C G T A G C T A G C T A C G T C G T A C T G A A C G T A C G T A G T C A C G T
A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

GSX2/MA0893.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTTTTAATTC--
--NTTAATTAGN
 A G T C A C G T A G C T A G C T A C G T C G T A C T G A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T C A G T A G C T C G A T C G T A C G T A G C A T C A G T C T G A T A C G C A G T

SHOX/MA0630.1/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CTTTTAATTC-
---TTAATTGG
 A G T C A C G T A G C T A G C T A C G T C G T A C T G A A C G T A C G T A G T C A C G T
A C G T A C G T A C G T G A C T G C A T T C G A C T G A A C G T C G A T C T A G T C A G

MIXL1/MA0662.1/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTTTTAATTC--
--NNTAATTANN
 A G T C A C G T A G C T A G C T A C G T C G T A C T G A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C T G A G C T C G A T T C G A T C G A C G A T A G C T C T G A T C A G G C T A

LMX1B/MA0703.1/Jaspar

Match Rank:10
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CTTTTAATTC-
---TTAATTAN
 A G T C A C G T A G C T A G C T A C G T C G T A C T G A A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A G C T C G A T G C T A G C T A C G A T G C A T C T G A T G C A