Information for 2-AGCWGWGRTTTMMCMC (Motif 2)

C G T A C T A G A G T C C G T A A C T G G C A T A C T G C T G A A C G T A C G T A C G T G T A C G T C A G T A C T G C A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A C T G C G T A G T C A C G T A A G C T A G T C C G T A A G T C C G A T A C T G A G T C A C G T
p-value:1e-13
log p-value:-3.098e+01
Information Content per bp:1.842
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.7 +/- 25.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:AGCWGWGRTTTMMCMC
TGCTGTGATTT-----
 C G T A C T A G A G T C C G T A A C T G G C A T A C T G C T G A A C G T A C G T A C G T G T A C G T C A G T A C T G C A A G T C
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AGCWGWGRTTTMMCMC
-GCAGTGATTT-----
 C G T A C T A G A G T C C G T A A C T G G C A T A C T G C T G A A C G T A C G T A C G T G T A C G T C A G T A C T G C A A G T C
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGCWGWGRTTTMMCMC
--CNGTGATTTN----
 C G T A C T A G A G T C C G T A A C T G G C A T A C T G C T G A A C G T A C G T A C G T G T A C G T C A G T A C T G C A A G T C
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGCWGWGRTTTMMCMC
-GCTGTGGTTT-----
 C G T A C T A G A G T C C G T A A C T G G C A T A C T G C T G A A C G T A C G T A C G T G T A C G T C A G T A C T G C A A G T C
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGCWGWGRTTTMMCMC
-NNTGTGGTTT-----
 C G T A C T A G A G T C C G T A A C T G G C A T A C T G C T G A A C G T A C G T A C G T G T A C G T C A G T A C T G C A A G T C
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGCWGWGRTTTMMCMC
--CTGTGGTTTN----
 C G T A C T A G A G T C C G T A A C T G G C A T A C T G C T G A A C G T A C G T A C G T G T A C G T C A G T A C T G C A A G T C
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGCWGWGRTTTMMCMC------
-----NNTTTTCACACCTTNNN
 C G T A C T A G A G T C C G T A A C T G G C A T A C T G C T G A A C G T A C G T A C G T G T A C G T C A G T A C T G C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

PH0037.1_Hdx/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGCWGWGRTTTMMCMC-
TNNNATGATTTCNNCNN
 C G T A C T A G A G T C C G T A A C T G G C A T A C T G C T G A A C G T A C G T A C G T G T A C G T C A G T A C T G C A A G T C A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:AGCWGWGRTTTMMCMC--
--------TTTCACACCT
 C G T A C T A G A G T C C G T A A C T G G C A T A C T G C T G A A C G T A C G T A C G T G T A C G T C A G T A C T G C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCWGWGRTTTMMCMC
GTCTGTGGTTT-----
 C G T A C T A G A G T C C G T A A C T G G C A T A C T G C T G A A C G T A C G T A C G T G T A C G T C A G T A C T G C A A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T