Information for 11-GGAATWGTGT (Motif 19)

A T C G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A G T C C G A T C G T A A C G T A C G T G T A C A T G C
p-value:1e-7
log p-value:-1.839e+01
Information Content per bp:1.915
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif23.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets58.4 +/- 27.6bp
Average Position of motif in Background50.8 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGAATWGTGT---
NNNCCATTGTGTNAN
 A C G T A C G T A T C G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGAATWGTGT----
AAAATTGTTATGAA
 A T C G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGAATWGTGT----
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A T C G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0177.1_Sox7_2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGAATWGTGT---------
GTGCTAATTGTGTGTGTACGCT
 A C G T A C G T A C G T A T C G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGAATWGTGT--
---ATTGTTTAN
 A T C G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGAATWGTGT------
NNNNTTGTGTGCTTNN
 A T C G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0066.1_Sox17_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGAATWGTGT--
NNATNAATTGTTTNN
 A C G T A C G T A C G T A T C G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGAATWGTGT
NCTGGAATGC---
 A C G T A C G T A C G T A T C G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGAATWGTGT-----
CNNNTATTGTTCNNNNN
 A C G T A C G T A T C G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGAATWGTGT
CTCATTGTC-
 A T C G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T