Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-20 | -4.755e+01 | 0.0000 | 82.0 | 9.66% | 1317.6 | 2.83% | motif file (matrix) |
svg |
2 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-18 | -4.313e+01 | 0.0000 | 137.0 | 16.14% | 3277.9 | 7.04% | motif file (matrix) |
svg |
3 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-18 | -4.172e+01 | 0.0000 | 158.0 | 18.61% | 4132.6 | 8.88% | motif file (matrix) |
svg |
4 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-18 | -4.156e+01 | 0.0000 | 94.0 | 11.07% | 1836.1 | 3.94% | motif file (matrix) |
svg |
5 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-17 | -3.950e+01 | 0.0000 | 102.0 | 12.01% | 2165.4 | 4.65% | motif file (matrix) |
svg |
6 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-16 | -3.895e+01 | 0.0000 | 71.0 | 8.36% | 1192.8 | 2.56% | motif file (matrix) |
svg |
7 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-16 | -3.863e+01 | 0.0000 | 72.0 | 8.48% | 1229.3 | 2.64% | motif file (matrix) |
svg |
8 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-15 | -3.680e+01 | 0.0000 | 161.0 | 18.96% | 4486.1 | 9.64% | motif file (matrix) |
svg |
9 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-15 | -3.629e+01 | 0.0000 | 178.0 | 20.97% | 5208.0 | 11.19% | motif file (matrix) |
svg |
10 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-15 | -3.569e+01 | 0.0000 | 53.0 | 6.24% | 756.2 | 1.62% | motif file (matrix) |
svg |
11 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-15 | -3.461e+01 | 0.0000 | 110.0 | 12.96% | 2623.7 | 5.64% | motif file (matrix) |
svg |
12 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-13 | -3.141e+01 | 0.0000 | 214.0 | 25.21% | 7064.0 | 15.17% | motif file (matrix) |
svg |
13 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-13 | -3.057e+01 | 0.0000 | 121.0 | 14.25% | 3212.0 | 6.90% | motif file (matrix) |
svg |
14 |
| Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer | 1e-13 | -3.039e+01 | 0.0000 | 58.0 | 6.83% | 1012.9 | 2.18% | motif file (matrix) |
svg |
15 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-11 | -2.741e+01 | 0.0000 | 92.0 | 10.84% | 2256.8 | 4.85% | motif file (matrix) |
svg |
16 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-10 | -2.472e+01 | 0.0000 | 30.0 | 3.53% | 362.3 | 0.78% | motif file (matrix) |
svg |
17 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-10 | -2.413e+01 | 0.0000 | 23.0 | 2.71% | 215.2 | 0.46% | motif file (matrix) |
svg |
18 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-9 | -2.222e+01 | 0.0000 | 91.0 | 10.72% | 2453.5 | 5.27% | motif file (matrix) |
svg |
19 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-8 | -1.975e+01 | 0.0000 | 26.0 | 3.06% | 344.2 | 0.74% | motif file (matrix) |
svg |
20 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-7 | -1.839e+01 | 0.0000 | 136.0 | 16.02% | 4560.0 | 9.80% | motif file (matrix) |
svg |
21 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-7 | -1.820e+01 | 0.0000 | 284.0 | 33.45% | 11572.4 | 24.86% | motif file (matrix) |
svg |
22 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-7 | -1.816e+01 | 0.0000 | 347.0 | 40.87% | 14773.0 | 31.73% | motif file (matrix) |
svg |
23 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-7 | -1.710e+01 | 0.0000 | 209.0 | 24.62% | 8031.2 | 17.25% | motif file (matrix) |
svg |
24 |
| GFY(?)/Promoter/Homer | 1e-7 | -1.706e+01 | 0.0000 | 14.0 | 1.65% | 113.6 | 0.24% | motif file (matrix) |
svg |
25 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-7 | -1.684e+01 | 0.0000 | 13.0 | 1.53% | 97.6 | 0.21% | motif file (matrix) |
svg |
26 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-5 | -1.364e+01 | 0.0000 | 128.0 | 15.08% | 4597.9 | 9.88% | motif file (matrix) |
svg |
27 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.311e+01 | 0.0000 | 14.0 | 1.65% | 158.2 | 0.34% | motif file (matrix) |
svg |
28 |
| Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-5 | -1.310e+01 | 0.0000 | 8.0 | 0.94% | 44.9 | 0.10% | motif file (matrix) |
svg |
29 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-5 | -1.287e+01 | 0.0000 | 9.0 | 1.06% | 61.2 | 0.13% | motif file (matrix) |
svg |
30 |
| Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer | 1e-5 | -1.209e+01 | 0.0001 | 72.0 | 8.48% | 2269.4 | 4.87% | motif file (matrix) |
svg |
31 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-5 | -1.192e+01 | 0.0001 | 38.0 | 4.48% | 936.7 | 2.01% | motif file (matrix) |
svg |
32 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.177e+01 | 0.0001 | 19.0 | 2.24% | 312.1 | 0.67% | motif file (matrix) |
svg |
33 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-4 | -1.109e+01 | 0.0002 | 101.0 | 11.90% | 3610.4 | 7.76% | motif file (matrix) |
svg |
34 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.909e+00 | 0.0005 | 48.0 | 5.65% | 1422.5 | 3.06% | motif file (matrix) |
svg |
35 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -9.807e+00 | 0.0006 | 32.0 | 3.77% | 809.0 | 1.74% | motif file (matrix) |
svg |
36 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-4 | -9.566e+00 | 0.0007 | 81.0 | 9.54% | 2853.8 | 6.13% | motif file (matrix) |
svg |
37 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-3 | -8.692e+00 | 0.0017 | 138.0 | 16.25% | 5598.6 | 12.03% | motif file (matrix) |
svg |
38 |
| Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer | 1e-3 | -8.692e+00 | 0.0017 | 102.0 | 12.01% | 3894.6 | 8.37% | motif file (matrix) |
svg |
39 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-3 | -8.555e+00 | 0.0018 | 109.0 | 12.84% | 4237.0 | 9.10% | motif file (matrix) |
svg |
40 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-3 | -8.502e+00 | 0.0018 | 57.0 | 6.71% | 1892.2 | 4.06% | motif file (matrix) |
svg |
41 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-3 | -8.413e+00 | 0.0020 | 88.0 | 10.37% | 3278.3 | 7.04% | motif file (matrix) |
svg |
42 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-3 | -8.340e+00 | 0.0021 | 78.0 | 9.19% | 2831.6 | 6.08% | motif file (matrix) |
svg |
43 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-3 | -7.869e+00 | 0.0032 | 206.0 | 24.26% | 9083.1 | 19.51% | motif file (matrix) |
svg |
44 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-3 | -7.504e+00 | 0.0046 | 58.0 | 6.83% | 2016.8 | 4.33% | motif file (matrix) |
svg |
45 |
| Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer | 1e-3 | -7.478e+00 | 0.0046 | 100.0 | 11.78% | 3939.9 | 8.46% | motif file (matrix) |
svg |
46 |
| Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer | 1e-3 | -7.270e+00 | 0.0055 | 169.0 | 19.91% | 7325.7 | 15.74% | motif file (matrix) |
svg |
47 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.165e+00 | 0.0060 | 63.0 | 7.42% | 2268.5 | 4.87% | motif file (matrix) |
svg |
48 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-3 | -6.913e+00 | 0.0075 | 52.0 | 6.12% | 1803.6 | 3.87% | motif file (matrix) |
svg |
49 |
| GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.903e+00 | 0.0075 | 9.0 | 1.06% | 135.7 | 0.29% | motif file (matrix) |
svg |
50 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-2 | -6.867e+00 | 0.0076 | 55.0 | 6.48% | 1939.1 | 4.17% | motif file (matrix) |
svg |
51 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.587e+00 | 0.0098 | 50.0 | 5.89% | 1743.2 | 3.74% | motif file (matrix) |
svg |
52 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.468e+00 | 0.0109 | 112.0 | 13.19% | 4644.2 | 9.98% | motif file (matrix) |
svg |
53 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-2 | -6.400e+00 | 0.0114 | 129.0 | 15.19% | 5483.7 | 11.78% | motif file (matrix) |
svg |
54 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.162e+00 | 0.0142 | 35.0 | 4.12% | 1131.0 | 2.43% | motif file (matrix) |
svg |
55 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.093e+00 | 0.0150 | 66.0 | 7.77% | 2512.6 | 5.40% | motif file (matrix) |
svg |
56 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -6.014e+00 | 0.0159 | 31.0 | 3.65% | 973.2 | 2.09% | motif file (matrix) |
svg |
57 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -5.910e+00 | 0.0173 | 31.0 | 3.65% | 980.5 | 2.11% | motif file (matrix) |
svg |
58 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -5.882e+00 | 0.0175 | 40.0 | 4.71% | 1365.0 | 2.93% | motif file (matrix) |
svg |
59 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.875e+00 | 0.0175 | 24.0 | 2.83% | 697.0 | 1.50% | motif file (matrix) |
svg |
60 |
| ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.799e+00 | 0.0184 | 4.0 | 0.47% | 32.9 | 0.07% | motif file (matrix) |
svg |
61 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.595e+00 | 0.0222 | 39.0 | 4.59% | 1345.0 | 2.89% | motif file (matrix) |
svg |
62 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-2 | -5.556e+00 | 0.0227 | 36.0 | 4.24% | 1218.8 | 2.62% | motif file (matrix) |
svg |
63 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-2 | -5.448e+00 | 0.0249 | 14.0 | 1.65% | 337.4 | 0.72% | motif file (matrix) |
svg |
64 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -5.438e+00 | 0.0249 | 66.0 | 7.77% | 2586.1 | 5.56% | motif file (matrix) |
svg |
65 |
| JunD(bZIP)/K562-JunD-ChIP-Seq/Homer | 1e-2 | -5.419e+00 | 0.0249 | 9.0 | 1.06% | 169.3 | 0.36% | motif file (matrix) |
svg |
66 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.283e+00 | 0.0280 | 33.0 | 3.89% | 1110.6 | 2.39% | motif file (matrix) |
svg |
67 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -5.283e+00 | 0.0280 | 24.0 | 2.83% | 732.7 | 1.57% | motif file (matrix) |
svg |
68 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.248e+00 | 0.0281 | 21.0 | 2.47% | 613.4 | 1.32% | motif file (matrix) |
svg |
69 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-2 | -5.218e+00 | 0.0286 | 38.0 | 4.48% | 1333.4 | 2.86% | motif file (matrix) |
svg |
70 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-2 | -5.212e+00 | 0.0286 | 78.0 | 9.19% | 3182.1 | 6.84% | motif file (matrix) |
svg |
71 |
| E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer | 1e-2 | -5.194e+00 | 0.0286 | 31.0 | 3.65% | 1031.7 | 2.22% | motif file (matrix) |
svg |
72 |
| ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.164e+00 | 0.0289 | 9.0 | 1.06% | 176.2 | 0.38% | motif file (matrix) |
svg |
73 |
| E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.091e+00 | 0.0307 | 26.0 | 3.06% | 827.4 | 1.78% | motif file (matrix) |
svg |
74 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.043e+00 | 0.0318 | 33.0 | 3.89% | 1129.3 | 2.43% | motif file (matrix) |
svg |
75 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -4.803e+00 | 0.0398 | 29.0 | 3.42% | 975.2 | 2.09% | motif file (matrix) |
svg |