Information for 3-GGCCAAAMASATCATS (Motif 7)

A C T G C T A G T A G C G T A C G T C A G T C A C G T A T G A C C G T A T A G C C G T A A G C T A G T C G T C A C A G T A T C G
Reverse Opposite:
T A G C G T C A A C G T A C T G C T G A A C G T A T C G A C G T A C T G A C G T C A G T A C G T C A T G A C T G A G T C A G T C
p-value:1e-14
log p-value:-3.448e+01
Information Content per bp:1.743
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 26.6bp
Average Position of motif in Background41.2 +/- 38.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGCCAAAMASATCATS--
-GACAGAGATATCAGTGT
 A C T G C T A G T A G C G T A C G T C A G T C A C G T A T G A C C G T A T A G C C G T A A G C T A G T C G T C A C A G T A T C G A C G T A C G T
A C G T T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGCCAAAMASATCATS
AACACCAAAACAAAGGA--
 A C G T A C G T A C G T A C T G C T A G T A G C G T A C G T C A G T C A C G T A T G A C C G T A T A G C C G T A A G C T A G T C G T C A C A G T A T C G
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------GGCCAAAMASATCATS
NNNVCTGWGYAAACASN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G T A G C G T A C G T C A G T C A C G T A T G A C C G T A T A G C C G T A A G C T A G T C G T C A C A G T A T C G
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GGCCAAAMASATCATS
-----AAGATATCCTT
 A C T G C T A G T A G C G T A C G T C A G T C A C G T A T G A C C G T A T A G C C G T A A G C T A G T C G T C A C A G T A T C G
A C G T A C G T A C G T A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGCCAAAMASATCATS
TGCCAAAATAAACANN
 A C T G C T A G T A G C G T A C G T C A G T C A C G T A T G A C C G T A T A G C C G T A A G C T A G T C G T C A C A G T A T C G
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGCCAAAMASATCATS
ATGCTAAAAATAGAA--
 A C G T A C T G C T A G T A G C G T A C G T C A G T C A C G T A T G A C C G T A T A G C C G T A A G C T A G T C G T C A C A G T A T C G
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GGCCAAAMASATCATS--
--------ACATCCTGNT
 A C T G C T A G T A G C G T A C G T C A G T C A C G T A T G A C C G T A T A G C C G T A A G C T A G T C G T C A C A G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GGCCAAAMASATCATS-
-----ACCACATCCTGT
 A C T G C T A G T A G C G T A C G T C A G T C A C G T A T G A C C G T A T A G C C G T A A G C T A G T C G T C A C A G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

Hoxa9/MA0594.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GGCCAAAMASATCATS
---GCCATAAATCA--
 A C T G C T A G T A G C G T A C G T C A G T C A C G T A T G A C C G T A T A G C C G T A A G C T A G T C G T C A C A G T A T C G
A C G T A C G T A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GGCCAAAMASATCATS
-GCTAAAAATAGC---
 A C T G C T A G T A G C G T A C G T C A G T C A C G T A T G A C C G T A T A G C C G T A A G C T A G T C G T C A C A G T A T C G
A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T