Information for 7-TTTWRATAMAYAG (Motif 12)

A C G T A C G T C G A T C G A T C T A G C G T A A C G T C G T A G T C A C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T C T A G A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A G T C A C G T A
p-value:1e-11
log p-value:-2.649e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 18.5bp
Average Position of motif in Background62.8 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTTWRATAMAYAG
-WWATRTAAACAN
 A C G T A C G T C G A T C G A T C T A G C G T A A C G T C G T A G T C A C G T A A G T C C G T A A C T G
A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTTWRATAMAYAG
---AAATAAACA-
 A C G T A C G T C G A T C G A T C T A G C G T A A C G T C G T A G T C A C G T A A G T C C G T A A C T G
A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TTTWRATAMAYAG
-----GTAAACA-
 A C G T A C G T C G A T C G A T C T A G C G T A A C G T C G T A G T C A C G T A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTTWRATAMAYAG-
--WWTRTAAACAVG
 A C G T A C G T C G A T C G A T C T A G C G T A A C G T C G T A G T C A C G T A A G T C C G T A A C T G A C G T
A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

Arid3a/MA0151.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTTWRATAMAYAG
-TTTAAT------
 A C G T A C G T C G A T C G A T C T A G C G T A A C G T C G T A G T C A C G T A A G T C C G T A A C T G
A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TTTWRATAMAYAG
-----GTAAACA-
 A C G T A C G T C G A T C G A T C T A G C G T A A C G T C G T A G T C A C G T A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTWRATAMAYAG-
NNNTTTTAATTAANNNN
 A C G T A C G T A C G T A C G T A C G T C G A T C G A T C T A G C G T A A C G T C G T A G T C A C G T A A G T C C G T A A C T G A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTWRATAMAYAG
ATTTGAATT-----
 A C G T A C G T A C G T C G A T C G A T C T A G C G T A A C G T C G T A G T C A C G T A A G T C C G T A A C T G
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TTTWRATAMAYAG-
---AAGTAAACAAA
 A C G T A C G T C G A T C G A T C T A G C G T A A C G T C G T A G T C A C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTTWRATAMAYAG
--WAAGTAAAYA-
 A C G T A C G T C G A T C G A T C T A G C G T A A C G T C G T A G T C A C G T A A G T C C G T A A C T G
A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T