Information for 7-KMKCCGGTKSMTTTGG (Motif 18)

A C T G G T C A A C T G A G T C A G T C A C T G A C T G A C G T A C G T A T C G G T A C A G C T C G A T C G A T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A C T G A A C T G A T G C G T C A C G T A A G T C A G T C T A C G A C T G G T A C A C G T G T A C
p-value:1e-11
log p-value:-2.615e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.2 +/- 25.7bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0055.1_Rfx4_1/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:KMKCCGGTKSMTTTGG--
---NNCGTTGCTATGGNN
 A C T G G T C A A C T G A G T C A G T C A C T G A C T G A C G T A C G T A T C G G T A C A G C T C G A T C G A T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:KMKCCGGTKSMTTTGG
AAACCGGTTT------
 A C T G G T C A A C T G A G T C A G T C A C T G A C T G A C G T A C G T A T C G G T A C A G C T C G A T C G A T A C T G A C T G
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-KMKCCGGTKSMTTTGG------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C T G G T C A A C T G A G T C A G T C A C T G A C T G A C G T A C G T A T C G G T A C A G C T C G A T C G A T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:KMKCCGGTKSMTTTGG--
---NCCGTTGCTANGNGN
 A C T G G T C A A C T G A G T C A G T C A C T G A C T G A C G T A C G T A T C G G T A C A G C T C G A T C G A T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:KMKCCGGTKSMTTTGG--
--NNTGTTTATTTTGGCA
 A C T G G T C A A C T G A G T C A G T C A C T G A C T G A C G T A C G T A T C G G T A C A G C T C G A T C G A T A C T G A C T G A C G T A C G T
A C G T A C G T C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

ETV2/MA0762.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--KMKCCGGTKSMTTTGG
TATTTCCGGTT-------
 A C G T A C G T A C T G G T C A A C T G A G T C A G T C A C T G A C T G A C G T A C G T A T C G G T A C A G C T C G A T C G A T A C T G A C T G
G A C T T C G A A G C T C G A T A C G T A G T C A G T C A C T G A T C G A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---KMKCCGGTKSMTTTGG
GTACATCCGGATTTTT---
 A C G T A C G T A C G T A C T G G T C A A C T G A G T C A G T C A C T G A C T G A C G T A C G T A T C G G T A C A G C T C G A T C G A T A C T G A C T G
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:KMKCCGGTKSMTTTGG
----CTGTTGCTAGGS
 A C T G G T C A A C T G A G T C A G T C A C T G A C T G A C G T A C G T A T C G G T A C A G C T C G A T C G A T A C T G A C T G
A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:KMKCCGGTKSMTTTGG----
----CGGTTGCCATGGCAAC
 A C T G G T C A A C T G A G T C A G T C A C T G A C T G A C G T A C G T A T C G G T A C A G C T C G A T C G A T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

Rfx1/MA0509.1/Jaspar

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:KMKCCGGTKSMTTTGG----
------GTTGCCATGGNAAC
 A C T G G T C A A C T G A G T C A G T C A C T G A C T G A C G T A C G T A T C G G T A C A G C T C G A T C G A T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C