Information for 6-GAGAKATGGC (Motif 9)

A T C G C G T A A T C G C G T A A C T G C G T A C G A T A T C G A C T G A T G C
Reverse Opposite:
A T C G A G T C A T G C C G T A A C G T T G A C A C G T T A G C C G A T T A G C
p-value:1e-9
log p-value:-2.212e+01
Information Content per bp:1.738
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif6.41%
Number of Background Sequences with motif1070.8
Percentage of Background Sequences with motif2.34%
Average Position of motif in Targets57.2 +/- 25.5bp
Average Position of motif in Background48.7 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GAGAKATGGC
AACAGATGGC
 A T C G C G T A A T C G C G T A A C T G C G T A C G A T A T C G A C T G A T G C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

Bhlha15/MA0607.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GAGAKATGGC
-ACATATGG-
 A T C G C G T A A T C G C G T A A C T G C G T A C G A T A T C G A C T G A T G C
A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T

Twist2/MA0633.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GAGAKATGGC
NACATATGGN
 A T C G C G T A A T C G C G T A A C T G C G T A C G A T A T C G A C T G A T G C
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GAGAKATGGC
AACAGATGGT
 A T C G C G T A A T C G C G T A A C T G C G T A C G A T A T C G A C T G A T G C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

HLTF/MA0109.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GAGAKATGGC-
-NNATAAGGNN
 A T C G C G T A A T C G C G T A A C T G C G T A C G A T A T C G A C T G A T G C A C G T
A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GAGAKATGGC
CAGATAAGGN
 A T C G C G T A A T C G C G T A A C T G C G T A C G A T A T C G A C T G A T G C
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GAGAKATGGC
AACAKATGGY
 A T C G C G T A A T C G C G T A A C T G C G T A C G A T A T C G A C T G A T G C
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GAGAKATGGC---
-CAAGATGGCGGC
 A T C G C G T A A T C G C G T A A C T G C G T A C G A T A T C G A C T G A T G C A C G T A C G T A C G T
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GAGAKATGGC----
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A T C G C G T A A T C G C G T A A C T G C G T A C G A T A T C G A C T G A T G C A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GAGAKATGGC
NAGATAAGNN
 A T C G C G T A A T C G C G T A A C T G C G T A C G A T A T C G A C T G A T G C
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A