Information for 7-TAGACAACWAWAT (Motif 8)

A G C T G T C A A C T G C G T A A T G C C G T A C G T A G T A C G C T A C T G A C G A T C T G A A C G T
Reverse Opposite:
C G T A A G C T G C T A A G C T C G A T A C T G C G A T A C G T T A C G A C G T A G T C C A G T T C G A
p-value:1e-10
log p-value:-2.426e+01
Information Content per bp:1.743
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif24.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets44.2 +/- 28.1bp
Average Position of motif in Background53.8 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TAGACAACWAWAT
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A G C T G T C A A C T G C G T A A T G C C G T A C G T A G T A C G C T A C T G A C G A T C T G A A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TAGACAACWAWAT
BCAGACWA------
 A C G T A G C T G T C A A C T G C G T A A T G C C G T A C G T A G T A C G C T A C T G A C G A T C T G A A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TAGACAACWAWAT
CAAATCCAGACATCACA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A A C T G C G T A A T G C C G T A C G T A G T A C G C T A C T G A C G A T C T G A A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TAGACAACWAWAT
CCAGACAG------
 A C G T A G C T G T C A A C T G C G T A A T G C C G T A C G T A G T A C G C T A C T G A C G A T C T G A A C G T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TAGACAACWAWAT
TTGACAG------
 A G C T G T C A A C T G C G T A A T G C C G T A C G T A G T A C G C T A C T G A C G A T C T G A A C G T
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TAGACAACWAWAT
-AGATAASR----
 A G C T G T C A A C T G C G T A A T G C C G T A C G T A G T A C G C T A C T G A C G A T C T G A A C G T
A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TAGACAACWAWAT
CCAGACRSVB----
 A C G T A G C T G T C A A C T G C G T A A T G C C G T A C G T A G T A C G C T A C T G A C G A T C T G A A C G T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TAGACAACWAWAT
CGTCTAGACA-------
 A C G T A C G T A C G T A C G T A G C T G T C A A C T G C G T A A T G C C G T A C G T A G T A C G C T A C T G A C G A T C T G A A C G T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TAGACAACWAWAT
AAAGTAAACAAAAATT-
 A C G T A C G T A C G T A C G T A G C T G T C A A C T G C G T A A T G C C G T A C G T A G T A C G C T A C T G A C G A T C T G A A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAGACAACWAWAT
RNAACAATGG---
 A G C T G T C A A C T G C G T A A T G C C G T A C G T A G T A C G C T A C T G A C G A T C T G A A C G T
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T