Information for 4-ATCTGCWSWT (Motif 5)

T C G A A C G T A G T C A C G T A C T G G T A C G C A T A T C G C G A T A C G T
Reverse Opposite:
C G T A C G T A T A G C C G T A C A T G A G T C C G T A A C T G C G T A A G C T
p-value:1e-12
log p-value:-2.793e+01
Information Content per bp:1.750
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif5.15%
Number of Background Sequences with motif613.4
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets51.4 +/- 27.3bp
Average Position of motif in Background51.3 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ATCTGCWSWT
VBSYGTCTGG----
 A C G T A C G T A C G T A C G T T C G A A C G T A G T C A C G T A C T G G T A C G C A T A T C G C G A T A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATCTGCWSWT
ACCATCTGTT---
 A C G T A C G T A C G T T C G A A C G T A G T C A C G T A C T G G T A C G C A T A T C G C G A T A C G T
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ATCTGCWSWT
GGTCTGGCAT-
 A C G T T C G A A C G T A G T C A C G T A C T G G T A C G C A T A T C G C G A T A C G T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------ATCTGCWSWT
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T A G T C A C G T A C T G G T A C G C A T A T C G C G A T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATCTGCWSWT
GCCATCTGTT---
 A C G T A C G T A C G T T C G A A C G T A G T C A C G T A C T G G T A C G C A T A T C G C G A T A C G T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATCTGCWSWT-----
GTCWGCTGTYYCTCT
 T C G A A C G T A G T C A C G T A C T G G T A C G C A T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATCTGCWSWT
CTGTCTGG----
 A C G T A C G T T C G A A C G T A G T C A C G T A C T G G T A C G C A T A T C G C G A T A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------ATCTGCWSWT-
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T A G T C A C G T A C T G G T A C G C A T A T C G C G A T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATCTGCWSWT--
CTTATCTCHMCATCT
 A C G T A C G T A C G T T C G A A C G T A G T C A C G T A C T G G T A C G C A T A T C G C G A T A C G T A C G T A C G T
A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATCTGCWSWT
RCCATMTGTT---
 A C G T A C G T A C G T T C G A A C G T A G T C A C G T A C T G G T A C G C A T A T C G C G A T A C G T
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T