Information for 11-CTRCCAGAACCTA (Motif 13)

A G T C G C A T C T A G A G T C G T A C C G T A C T A G C G T A C G T A A T G C A G T C A G C T G C T A
Reverse Opposite:
C G A T C T G A C T A G T A C G C G A T C G A T A G T C C G A T A C T G C T A G A G T C C G T A A C T G
p-value:1e-8
log p-value:-2.016e+01
Information Content per bp:1.727
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif127.5
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets46.4 +/- 27.4bp
Average Position of motif in Background49.6 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTRCCAGAACCTA
ATGCCAGACN---
 A G T C G C A T C T A G A G T C G T A C C G T A C T A G C G T A C G T A A T G C A G T C A G C T G C T A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTRCCAGAACCTA
--TCCAGATGTT-
 A G T C G C A T C T A G A G T C G T A C C G T A C T A G C G T A C G T A A T G C A G T C A G C T G C T A
A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTRCCAGAACCTA
-TGCCAA------
 A G T C G C A T C T A G A G T C G T A C C G T A C T A G C G T A C G T A A T G C A G T C A G C T G C T A
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CTRCCAGAACCTA
ACATGCTACCTAATAC--
 A C G T A C G T A C G T A C G T A C G T A G T C G C A T C T A G A G T C G T A C C G T A C T A G C G T A C G T A A T G C A G T C A G C T G C T A
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTRCCAGAACCTA
CTGCCCGCA----
 A G T C G C A T C T A G A G T C G T A C C G T A C T A G C G T A C G T A A T G C A G T C A G C T G C T A
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTRCCAGAACCTA-
NGNTCTAGAACCNGV
 A C G T A G T C G C A T C T A G A G T C G T A C C G T A C T A G C G T A C G T A A T G C A G T C A G C T G C T A A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CTRCCAGAACCTA
SCTGTCARCACC--
 A C G T A G T C G C A T C T A G A G T C G T A C C G T A C T A G C G T A C G T A A T G C A G T C A G C T G C T A
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CTRCCAGAACCTA
ACTTGCTACCTACACC--
 A C G T A C G T A C G T A C G T A C G T A G T C G C A T C T A G A G T C G T A C C G T A C T A G C G T A C G T A A T G C A G T C A G C T G C T A
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CTRCCAGAACCTA
TTGCCAAG-----
 A G T C G C A T C T A G A G T C G T A C C G T A C T A G C G T A C G T A A T G C A G T C A G C T G C T A
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTRCCAGAACCTA
--RCCGGAARYN-
 A G T C G C A T C T A G A G T C G T A C C G T A C T A G C G T A C G T A A T G C A G T C A G C T G C T A
A C G T A C G T T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T