Information for 4-CYRSCAGAGGGHG (Motif 2)

A T G C G A T C C T G A T A G C A G T C G C T A T A C G C G T A A C T G A T C G T A C G G A C T A C T G
Reverse Opposite:
A G T C C T G A A T G C A T G C T G A C A C G T A T G C C G A T T C A G A T C G G A C T C T A G A T C G
p-value:1e-59
log p-value:-1.361e+02
Information Content per bp:1.615
Number of Target Sequences with motif125.0
Percentage of Target Sequences with motif14.95%
Number of Background Sequences with motif1122.0
Percentage of Background Sequences with motif2.35%
Average Position of motif in Targets47.2 +/- 23.3bp
Average Position of motif in Background50.0 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CYRSCAGAGGGHG------
GCCASCAGGGGGCGCYVNNG
 A C G T A T G C G A T C C T G A T A G C A G T C G C T A T A C G C G T A A C T G A T C G T A C G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CYRSCAGAGGGHG---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A T G C G A T C C T G A T A G C A G T C G C T A T A C G C G T A A C T G A T C G T A C G G A C T A C T G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CYRSCAGAGGGHG----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A T G C G A T C C T G A T A G C A G T C G C T A T A C G C G T A A C T G A T C G T A C G G A C T A C T G A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CYRSCAGAGGGHG
--AACAGATGGC-
 A T G C G A T C C T G A T A G C A G T C G C T A T A C G C G T A A C T G A T C G T A C G G A C T A C T G
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CYRSCAGAGGGHG
--AACAGATGGT-
 A T G C G A T C C T G A T A G C A G T C G C T A T A C G C G T A A C T G A T C G T A C G G A C T A C T G
A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CYRSCAGAGGGHG-----
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A T G C G A T C C T G A T A G C A G T C G C T A T A C G C G T A A C T G A T C G T A C G G A C T A C T G A C G T A C G T A C G T A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CYRSCAGAGGGHG---
-----TAATGGCGGNC
 A T G C G A T C C T G A T A G C A G T C G C T A T A C G C G T A A C T G A T C G T A C G G A C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CYRSCAGAGGGHG--
-----GGAGGGGGAA
 A T G C G A T C C T G A T A G C A G T C G C T A T A C G C G T A A C T G A T C G T A C G G A C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CYRSCAGAGGGHG----
-------DGGGYGKGGC
 A T G C G A T C C T G A T A G C A G T C G C T A T A C G C G T A A C T G A T C G T A C G G A C T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CYRSCAGAGGGHG------
----NNVDGGGYGGGGCYN
 A T G C G A T C C T G A T A G C A G T C G C T A T A C G C G T A A C T G A T C G T A C G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A