Information for 6-GCATTTAGTC (Motif 13)

A T C G A G T C C G T A C G A T A G C T A C G T C T G A T C A G A C G T A T G C
Reverse Opposite:
A T C G G T C A A G T C A G C T T G C A C T G A C G T A A C G T A C T G A T G C
p-value:1e-9
log p-value:-2.218e+01
Information Content per bp:1.840
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif64.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets60.5 +/- 24.0bp
Average Position of motif in Background50.1 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISL2/MA0914.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCATTTAGTC
GCACTTAA--
 A T C G A G T C C G T A C G A T A G C T A C G T C T G A T C A G A C G T A T G C
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCATTTAGTC
NNCAATTANN-
 A C G T A T C G A G T C C G T A C G A T A G C T A C G T C T G A T C A G A C G T A T G C
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCATTTAGTC
BCMATTAG--
 A T C G A G T C C G T A C G A T A G C T A C G T C T G A T C A G A C G T A T G C
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCATTTAGTC
ANCGTTTANN-
 A C G T A T C G A G T C C G T A C G A T A G C T A C G T C T G A T C A G A C G T A T G C
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GCATTTAGTC-
NNNNTGAATTCANNNC
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G A T A G C T A C G T C T G A T C A G A C G T A T G C A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCATTTAGTC-----
WCATTTTGKCCTCYT
 A T C G A G T C C G T A C G A T A G C T A C G T C T G A T C A G A C G T A T G C A C G T A C G T A C G T A C G T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

Msx3/MA0709.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCATTTAGTC
CCAATTAA--
 A T C G A G T C C G T A C G A T A G C T A C G T C T G A T C A G A C G T A T G C
T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCATTTAGTC---
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G A T A G C T A C G T C T G A T C A G A C G T A T G C A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCATTTAGTC---
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G A T A G C T A C G T C T G A T C A G A C G T A T G C A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GCATTTAGTC-
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G A T A G C T A C G T C T G A T C A G A C G T A T G C A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G