Information for 9-GTGGTAAVTTCAA (Motif 11)

C T A G C G A T A C T G C T A G C A G T C G T A G C T A T A C G A C G T C G A T A G T C G T C A C G T A
Reverse Opposite:
C G A T A C G T A C T G G C T A C G T A A T G C C G A T C G A T G T C A A G T C A G T C C G T A G A T C
p-value:1e-9
log p-value:-2.264e+01
Information Content per bp:1.734
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif91.0
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets62.9 +/- 25.6bp
Average Position of motif in Background51.3 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTGGTAAVTTCAA
--GGGAATTTCC-
 C T A G C G A T A C T G C T A G C A G T C G T A G C T A T A C G A C G T C G A T A G T C G T C A C G T A
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTGGTAAVTTCAA--
ATGAATWATTCATGA
 C T A G C G A T A C T G C T A G C A G T C G T A G C T A T A C G A C G T C G A T A G T C G T C A C G T A A C G T A C G T
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTGGTAAVTTCAA
AATGGAAAAT----
 A C G T C T A G C G A T A C T G C T A G C A G T C G T A G C T A T A C G A C G T C G A T A G T C G T C A C G T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTGGTAAVTTCAA
CSTGGGAAAD----
 A C G T C T A G C G A T A C T G C T A G C A G T C G T A G C T A T A C G A C G T C G A T A G T C G T C A C G T A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTGGTAAVTTCAA
ATGCATAATTCA-
 C T A G C G A T A C T G C T A G C A G T C G T A G C T A T A C G A C G T C G A T A G T C G T C A C G T A
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T

PH0014.1_Cphx/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTGGTAAVTTCAA-
ATGATCGAATCAAA
 C T A G C G A T A C T G C T A G C A G T C G T A G C T A T A C G A C G T C G A T A G T C G T C A C G T A A C G T
C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTGGTAAVTTCAA
NATGGAAAAN----
 A C G T C T A G C G A T A C T G C T A G C A G T C G T A G C T A T A C G A C G T C G A T A G T C G T C A C G T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTAAVTTCAA
AAGATCGGAANTNNNA
 A C G T A C G T A C G T C T A G C G A T A C T G C T A G C A G T C G T A G C T A T A C G A C G T C G A T A G T C G T C A C G T A
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

PB0171.1_Sox18_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTGGTAAVTTCAA---
GGACTGAATTCATGCC
 C T A G C G A T A C T G C T A G C A G T C G T A G C T A T A C G A C G T C G A T A G T C G T C A C G T A A C G T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GTGGTAAVTTCAA
--GGGGATTTCC-
 C T A G C G A T A C T G C T A G C A G T C G T A G C T A T A C G A C G T C G A T A G T C G T C A C G T A
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T