Information for 5-GAACAAGATC (Motif 10)

T A C G G T C A T C G A T G A C C G T A T C G A C T A G G C T A A C G T A G T C
Reverse Opposite:
T C A G T G C A C G A T G A T C A G C T G C A T A C T G A G C T C A G T A T G C
p-value:1e-10
log p-value:-2.354e+01
Information Content per bp:1.662
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.59%
Number of Background Sequences with motif396.6
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets43.8 +/- 28.4bp
Average Position of motif in Background48.4 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GAACAAGATC--
TTAAGAACAATAAATT
 A C G T A C G T A C G T A C G T T A C G G T C A T C G A T G A C C G T A T C G A C T A G G C T A A C G T A G T C A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GAACAAGATC
-AACAAT---
 T A C G G T C A T C G A T G A C C G T A T C G A C T A G G C T A A C G T A G T C
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GAACAAGATC--
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C G T T A C G G T C A T C G A T G A C C G T A T C G A C T A G G C T A A C G T A G T C A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GAACAAGATC--
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T T A C G G T C A T C G A T G A C C G T A T C G A C T A G G C T A A C G T A G T C A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0200.1_Zfp187_2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GAACAAGATC--
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A C G T T A C G G T C A T C G A T G A C C G T A T C G A C T A G G C T A A C G T A G T C A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GAACAAGATC--
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T T A C G G T C A T C G A T G A C C G T A T C G A C T A G G C T A A C G T A G T C A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAACAAGATC---
TAGTGAACAATAGATTT
 A C G T A C G T A C G T A C G T T A C G G T C A T C G A T G A C C G T A T C G A C T A G G C T A A C G T A G T C A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GAACAAGATC
NTTNAGAACAATTA-
 A C G T A C G T A C G T A C G T A C G T T A C G G T C A T C G A T G A C C G T A T C G A C T A G G C T A A C G T A G T C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAACAAGATC
NAACAAT---
 T A C G G T C A T C G A T G A C C G T A T C G A C T A G G C T A A C G T A G T C
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAACAAGATC
GTAAACAAT---
 A C G T A C G T T A C G G T C A T C G A T G A C C G T A T C G A C T A G G C T A A C G T A G T C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T